Literature DB >> 18678939

Purification, crystallization and crystallographic analysis of Clostridium thermocellum endo-1,4-beta-D-xylanase 10B in complex with xylohexaose.

Shabir Najmudin1, Benedita A Pinheiro, Maria J Romão, José A M Prates, Carlos M G A Fontes.   

Abstract

The cellulosome of Clostridium thermocellum is a highly organized multi-enzyme complex of cellulases and hemicellulases involved in the hydrolysis of plant cell-wall polysaccharides. The bifunctional multi-modular xylanase Xyn10B is one of the hemicellulase components of the C. thermocellum cellulosome. The enzyme contains an internal glycoside hydrolase family 10 catalytic domain (GH10) and a C-terminal family 1 carbohydrate esterase domain (CE1). The N-terminal moiety of Xyn10B (residues 32-551), comprising a carbohydrate-binding module (CBM22-1) and the GH10 E337A mutant, was crystallized in complex with xylohexaose. The crystals belong to the trigonal space group P3(2)21 and contain a dimer in the asymmetric unit. The crystals diffracted to beyond 2.0 A resolution.

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Year:  2008        PMID: 18678939      PMCID: PMC2494957          DOI: 10.1107/S1744309108019696

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  22 in total

1.  Towards complete validated models in the next generation of ARP/wARP.

Authors:  Serge X Cohen; Richard J Morris; Francisco J Fernandez; Marouane Ben Jelloul; Mattheos Kakaris; Venkataraman Parthasarathy; Victor S Lamzin; Gerard J Kleywegt; Anastassis Perrakis
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

2.  Insights into the structural determinants of cohesin-dockerin specificity revealed by the crystal structure of the type II cohesin from Clostridium thermocellum SdbA.

Authors:  Ana L Carvalho; Virginia M R Pires; Tracey M Gloster; Johan P Turkenburg; José A M Prates; Luís M A Ferreira; Maria J Romão; Gideon J Davies; Carlos M G A Fontes; Harry J Gilbert
Journal:  J Mol Biol       Date:  2005-06-24       Impact factor: 5.469

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  The resistance of cellulases and xylanases to proteolytic inactivation.

Authors:  C M Fontes; J Hall; B H Hirst; G P Hazlewood; H J Gilbert
Journal:  Appl Microbiol Biotechnol       Date:  1995-04       Impact factor: 4.813

5.  A common protein fold and similar active site in two distinct families of beta-glycanases.

Authors:  R Dominguez; H Souchon; S Spinelli; Z Dauter; K S Wilson; S Chauvaux; P Béguin; P M Alzari
Journal:  Nat Struct Biol       Date:  1995-07

6.  Molecular determinants of substrate specificity in the feruloyl esterase module of xylanase 10B from Clostridium thermocellum.

Authors:  Nicolas Tarbouriech; José A M Prates; Carlos M G A Fontes; Gideon J Davies
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-01-19

7.  The X6 "thermostabilizing" domains of xylanases are carbohydrate-binding modules: structure and biochemistry of the Clostridium thermocellum X6b domain.

Authors:  S J Charnock; D N Bolam; J P Turkenburg; H J Gilbert; L M Ferreira; G J Davies; C M Fontes
Journal:  Biochemistry       Date:  2000-05-02       Impact factor: 3.162

8.  Evidence for a general role for non-catalytic thermostabilizing domains in xylanases from thermophilic bacteria.

Authors:  C M Fontes; G P Hazlewood; E Morag; J Hall; B H Hirst; H J Gilbert
Journal:  Biochem J       Date:  1995-04-01       Impact factor: 3.857

9.  Structure-specificity relationships of an intracellular xylanase from Geobacillus stearothermophilus.

Authors:  V Solomon; A Teplitsky; S Shulami; G Zolotnitsky; Y Shoham; G Shoham
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-07-17

Review 10.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14
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