Literature DB >> 7661899

A low-barrier hydrogen bond in the catalytic triad of serine proteases.

P A Frey1, S A Whitt, J B Tobin.   

Abstract

Spectroscopic properties of chymotrypsin and model compounds indicate that a low-barrier hydrogen bond participates in the mechanism of serine protease action. A low-barrier hydrogen bond between N delta 1 of His57 and the beta-carboxyl group of Asp102 in chymotrypsin can facilitate the formation of the tetrahedral adduct, and the nuclear magnetic resonance properties of this proton indicate that it is a low-barrier hydrogen bond. These conclusions are supported by the chemical shift of this proton, the deuterium isotope effect on the chemical shift, and the properties of hydrogen-bonded model compounds in organic solvents, including the hydrogen bond in cis-urocanic acid, in which the imidazole ring is internally hydrogen-bonded to the carboxyl group.

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Year:  1994        PMID: 7661899     DOI: 10.1126/science.7661899

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  116 in total

1.  Inhibitor binding induces active site stabilization of the HCV NS3 protein serine protease domain.

Authors:  G Barbato; D O Cicero; F Cordier; F Narjes; B Gerlach; S Sambucini; S Grzesiek; V G Matassa; R De Francesco; R Bazzo
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2.  An improved hydrogen bond potential: impact on medium resolution protein structures.

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Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

3.  Fast estimation of hydrogen-bonding donor and acceptor propensities: a GMIPp study.

Authors:  Albert Salichs; M López; V Segarra; Modesto Orozco; F Javier Luque
Journal:  J Comput Aided Mol Des       Date:  2002 Aug-Sep       Impact factor: 3.686

4.  'pH-jump' crystallographic analyses of gamma-lactam-porcine pancreatic elastase complexes.

Authors:  P A Wright; R C Wilmouth; I J Clifton; C J Schofield
Journal:  Biochem J       Date:  2000-10-15       Impact factor: 3.857

5.  Histidines, heart of the hydrogen ion channel from influenza A virus: toward an understanding of conductance and proton selectivity.

Authors:  Jun Hu; Riqiang Fu; Katsuyuki Nishimura; Li Zhang; Huan-Xiang Zhou; David D Busath; Viksita Vijayvergiya; Timothy A Cross
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-21       Impact factor: 11.205

6.  The role of hydrogen bonding in the enzymatic reaction catalyzed by HIV-1 protease.

Authors:  Joanna Trylska; Pawel Grochowski; J Andrew McCammon
Journal:  Protein Sci       Date:  2004-02       Impact factor: 6.725

7.  Complete set of glycosyltransferase structures in the calicheamicin biosynthetic pathway reveals the origin of regiospecificity.

Authors:  Aram Chang; Shanteri Singh; Kate E Helmich; Randal D Goff; Craig A Bingman; Jon S Thorson; George N Phillips
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-10       Impact factor: 11.205

8.  Field effects induce bathochromic shifts in xanthene dyes.

Authors:  Martha Sibrian-Vazquez; Jorge O Escobedo; Mark Lowry; Frank R Fronczek; Robert M Strongin
Journal:  J Am Chem Soc       Date:  2012-06-05       Impact factor: 15.419

9.  Determination of the ionization state of the active-site histidine in a subtilisin-(chloromethane inhibitor) derivative by 13C-NMR.

Authors:  T P O'Connell; J P Malthouse
Journal:  Biochem J       Date:  1996-07-01       Impact factor: 3.857

10.  Tautomerism, acid-base equilibria, and H-bonding of the six histidines in subtilisin BPN' by NMR.

Authors:  Regina M Day; Craig J Thalhauser; James L Sudmeier; Matthew P Vincent; Ekaterina V Torchilin; David G Sanford; Christopher W Bachovchin; William W Bachovchin
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

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