Literature DB >> 11023818

'pH-jump' crystallographic analyses of gamma-lactam-porcine pancreatic elastase complexes.

P A Wright1, R C Wilmouth, I J Clifton, C J Schofield.   

Abstract

beta-Lactams inhibit a range of enzymes via acylation of nucleophilic serine residues. Certain gamma-lactam analogues of monocyclic beta-lactams have also been shown to be reversible inhibitors of porcine pancreatic elastase (PPE), forming acyl-enzyme complexes that are stable with respect to hydrolysis. Crystallographic analysis at pH 5 of an acyl-enzyme complex formed with PPE and one of these inhibitors revealed the ester carbonyl located in the oxyanion hole in a similar conformation to that observed in the structure of a complex formed between a heptapeptide (beta-casomorphin-7) and PPE. Only weak electron density was observed for the His-57 side chain in its 'native' conformation. Instead, the His-57 side chain predominantly adopted a conformation rotated approx. 90 degrees from its normal position. PPE-gamma-lactam crystals were subjected to 'pH-jumps' by placing the crystals in a buffer of increased pH prior to freezing for data collection. The results indicate that the conformation of the gamma-lactam-derived acyl-enzyme species in the PPE active site is dependent on pH, a result having implications for the analysis of other serine protease-inhibitor structures at non-catalytic pH values. The results help to define the stereoelectronic relationship between the ester of the acyl-enzyme complex, the side chain of His-57 and the incoming nucleophile during the reversible (de)acylation steps, implying it is closely analogous to the hydrolytic deacylation step during catalytic peptide hydrolysis.

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Year:  2000        PMID: 11023818      PMCID: PMC1221368     

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  14 in total

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3.  Inhibition of elastase by N-sulfonylaryl beta-lactams: anatomy of a stable acyl-enzyme complex.

Authors:  R C Wilmouth; N J Westwood; K Anderson; W Brownlee; T D Claridge; I J Clifton; G J Pritchard; R T Aplin; C J Schofield
Journal:  Biochemistry       Date:  1998-12-15       Impact factor: 3.162

4.  Occurrence of a serine residue in the penicillin-binding site of the exocellular DD-carboxy-peptidase-transpeptidase from Streptomyces R61.

Authors:  J M Frère; C Duez; J M Ghuysen; J Vandekerkhove
Journal:  FEBS Lett       Date:  1976-11       Impact factor: 4.124

5.  Structure of a specific acyl-enzyme complex formed between beta-casomorphin-7 and porcine pancreatic elastase.

Authors:  R C Wilmouth; I J Clifton; C V Robinson; P L Roach; R T Aplin; N J Westwood; J Hajdu; C J Schofield
Journal:  Nat Struct Biol       Date:  1997-06

6.  Novel natural product 5,5-trans-lactone inhibitors of human alpha-thrombin: mechanism of action and structural studies.

Authors:  M P Weir; S S Bethell; A Cleasby; C J Campbell; R J Dennis; C J Dix; H Finch; H Jhoti; C J Mooney; S Patel; C M Tang; M Ward; A J Wonacott; C W Wharton
Journal:  Biochemistry       Date:  1998-05-12       Impact factor: 3.162

7.  Inhibition of human serine proteases by substituted 2-azetidinones.

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Journal:  Arch Biochem Biophys       Date:  1992-08-01       Impact factor: 4.013

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Authors:  W B Knight; B G Green; R M Chabin; P Gale; A L Maycock; H Weston; D W Kuo; W M Westler; C P Dorn; P E Finke
Journal:  Biochemistry       Date:  1992-09-08       Impact factor: 3.162

9.  Structure of native porcine pancreatic elastase at 1.65 A resolutions.

Authors:  E Meyer; G Cole; R Radhakrishnan; O Epp
Journal:  Acta Crystallogr B       Date:  1988-02-01

10.  A low-barrier hydrogen bond in the catalytic triad of serine proteases.

Authors:  P A Frey; S A Whitt; J B Tobin
Journal:  Science       Date:  1994-06-24       Impact factor: 47.728

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2.  Investigations on recyclisation and hydrolysis in avibactam mediated serine β-lactamase inhibition.

Authors:  Hwanho Choi; Robert S Paton; Hwangseo Park; Christopher J Schofield
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