Literature DB >> 7608090

Oligoribonuclease is distinct from the other known exoribonucleases of Escherichia coli.

D Yu1, M P Deutscher.   

Abstract

Oligoribonuclease, an exoribonuclease specific for small oligoribonucleotides, was initially characterized 20 years ago (S. K. Niyogi and A. K. Datta, J. Biol. Chem. 250:7307-7312, 1975) and shown to be different from RNase II and polynucleotide phosphorylase. Here we demonstrate, using mutant strains and purified enzymes, that oligoribonuclease is not a manifestation of RNases D, BN, T, PH, and R, exoribonucleases discovered subsequently. Thus, oligoribonuclease is the eighth distinct exoribonuclease discovered in Escherichia coli. We also show that oligoribonuclease copurifies with polynucleotide phosphorylase.

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Year:  1995        PMID: 7608090      PMCID: PMC177148          DOI: 10.1128/jb.177.14.4137-4139.1995

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  16 in total

1.  RNase PH is essential for tRNA processing and viability in RNase-deficient Escherichia coli cells.

Authors:  K O Kelly; N B Reuven; Z Li; M P Deutscher
Journal:  J Biol Chem       Date:  1992-08-15       Impact factor: 5.157

2.  A novel oligoribonuclease of Escherichia coli. II. Mechanism of action.

Authors:  A K Datta; K Niyogi
Journal:  J Biol Chem       Date:  1975-09-25       Impact factor: 5.157

3.  Copurification of E. coli RNAase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation.

Authors:  A J Carpousis; G Van Houwe; C Ehretsmann; H M Krisch
Journal:  Cell       Date:  1994-03-11       Impact factor: 41.582

4.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

5.  The processive degradation of individual polyribonucleotide chains. I. Escherichia coli ribonuclease II.

Authors:  N G Nossal; M F Singer
Journal:  J Biol Chem       Date:  1968-03-10       Impact factor: 5.157

6.  Purification and characterization of Escherichia coli RNase T.

Authors:  M P Deutscher; C W Marlor
Journal:  J Biol Chem       Date:  1985-06-10       Impact factor: 5.157

7.  Ribonuclease T: new exoribonuclease possibly involved in end-turnover of tRNA.

Authors:  M P Deutscher; C W Marlor; R Zaniewski
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

8.  Escherichia coli RNase D: sequencing of the rnd structural gene and purification of the overexpressed protein.

Authors:  J R Zhang; M P Deutscher
Journal:  Nucleic Acids Res       Date:  1988-07-25       Impact factor: 16.971

9.  Overexpression and rapid purification of the orfE/rph gene product, RNase PH of Escherichia coli.

Authors:  K F Jensen; J T Andersen; P Poulsen
Journal:  J Biol Chem       Date:  1992-08-25       Impact factor: 5.157

10.  Apparent involvement of ribonuclease D in the 3' processing of tRNA precursors.

Authors:  H Cudny; M P Deutscher
Journal:  Proc Natl Acad Sci U S A       Date:  1980-02       Impact factor: 11.205

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  21 in total

Review 1.  Exoribonuclease superfamilies: structural analysis and phylogenetic distribution.

Authors:  Y Zuo; M P Deutscher
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

Review 2.  Processing endoribonucleases and mRNA degradation in bacteria.

Authors:  David Kennell
Journal:  J Bacteriol       Date:  2002-09       Impact factor: 3.490

3.  Oligoribonuclease Contributes to Tolerance to Aminoglycoside and β-Lactam Antibiotics by Regulating KatA in Pseudomonas aeruginosa.

Authors:  Bin Xia; Mei Li; Zhenyang Tian; Gukui Chen; Chang Liu; Yushan Xia; Yongxin Jin; Fang Bai; Zhihui Cheng; Shouguang Jin; Weihui Wu
Journal:  Antimicrob Agents Chemother       Date:  2019-05-24       Impact factor: 5.191

4.  Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of XC847, a 3'-5' oligoribonuclease from Xanthomonas campestris.

Authors:  Yan-You Wu; Ko-Hsin Chin; Chia-Cheng Chou; Cheng-Chung Lee; Hui-Lin Shr; Fei Philip Gao; Ping-Chiang Lyu; Andrew H-J Wang; Shan-Ho Chou
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-09-30

5.  Oligoribonuclease is encoded by a highly conserved gene in the 3'-5' exonuclease superfamily.

Authors:  X Zhang; L Zhu; M P Deutscher
Journal:  J Bacteriol       Date:  1998-05       Impact factor: 3.490

6.  Oligoribonuclease is an essential component of the mRNA decay pathway.

Authors:  S Ghosh; M P Deutscher
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

7.  NanoRNAs: a class of small RNAs that can prime transcription initiation in bacteria.

Authors:  Bryce E Nickels; Simon L Dove
Journal:  J Mol Biol       Date:  2011-06-16       Impact factor: 5.469

8.  Characterization of NrnA homologs from Mycobacterium tuberculosis and Mycoplasma pneumoniae.

Authors:  Guillaume Postic; Antoine Danchin; Undine Mechold
Journal:  RNA       Date:  2011-11-23       Impact factor: 4.942

9.  Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis, and Emerging Studies in Staphylococcus aureus.

Authors:  Kelsi L Anderson; Paul M Dunman
Journal:  Int J Microbiol       Date:  2009-03-05

10.  Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis.

Authors:  Ming Fang; Wencke-Maria Zeisberg; Ciaran Condon; Vasily Ogryzko; Antoine Danchin; Undine Mechold
Journal:  Nucleic Acids Res       Date:  2009-06-24       Impact factor: 16.971

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