Literature DB >> 7563117

Molecular evolutionary analysis of the YWVZ/7B globin gene cluster of the insect Chironomus thummi.

P M Trewitt1, R A Luhm, F Samad, S Ramakrishnan, W Y Kao, G Bergtrom.   

Abstract

We report the sequence of 8.1 kb of DNA containing the 3' end of one and seven other complete intronless globin genes from the YWVZ/7B locus of the dipteran Chironomus thummi thummi. One of these (ctt-v) appears to be a pseudogene by virtue of a premature termination codon, whereas the others encode apparently functional globin polypeptides. taken together with previously published data, the C. th. thummi YWVZ/7B locus codes for at least 11 globins, five of which differ from one another by no more than two amino acids. In contrast only nine globin genes are found in a comparable genomic clone isolated from C. th. piger. As indicated by sequence alignment, this difference in copy number can be attributed to a loss of one gene (fusion of globin genes 7B8 and 7B10) in the piger lines, coupled with a gain (globin gene 7B9) in the thummi lineage. Comparisons between the thummi and piger sequences showed that YWVZ/7B intergenic regions have maintained a level of 91% similarity since the thummi/piger divergence: most differences are simply due to single base substitutions or insertion/deletion events in either the thummi or the piger DNA, but three instances of partially overlapping deletions were also detected. A phylogenetic analysis of YWVZ/7B gene products was conducted, from which a plausible reconstruction of the evolutionary history of the locus was obtained. In addition, alignment of globin 7B amino acid sequences suggested that globin genes 7B2 and 7B3 (reported at the protein and cDNA level, respectively, but not contained on the C. th. thummi or C. th. piger genomic clones) are possibly chimeric genes. Given the trend toward expansion of the C. thummi globin gene family in general and of the globin 7B subfamily in particular, we propose that increased copy number of these genes has been positively selected as a mechanism to achieve a high Hb concentration in the larval hemolymph.

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 7563117

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  22 in total

1.  Nucleotide sequence of the intronless gene expressing a member of the globin VIIB subfamily from Chironomus thummi (Diptera).

Authors:  P M Trewitt; D A Saffarini; G Bergtrom
Journal:  Nucleic Acids Res       Date:  1987-07-10       Impact factor: 16.971

2.  Ontogenetic changes in hemoglobin synthesis of two strains of Chironomus tentans.

Authors:  D S English
Journal:  J Embryol Exp Morphol       Date:  1969-11

3.  An evolutionary tree for invertebrate globin sequences.

Authors:  M Goodman; J Pedwaydon; J Czelusniak; T Suzuki; T Gotoh; L Moens; F Shishikura; D Walz; S Vinogradov
Journal:  J Mol Evol       Date:  1988       Impact factor: 2.395

4.  Progressive sequence alignment as a prerequisite to correct phylogenetic trees.

Authors:  D F Feng; R F Doolittle
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

5.  Sequences of globin 6 gene alleles and linkage of globin 6 and 7B genes in the insect Chironomus thummi thummi.

Authors:  W Y Kao; G Bergtrom
Journal:  Gene       Date:  1995-02-14       Impact factor: 3.688

6.  Patterns of amino acids near signal-sequence cleavage sites.

Authors:  G von Heijne
Journal:  Eur J Biochem       Date:  1983-06-01

7.  [Hemoglobins. XXVI. Analysis of the primary structure of the dimeric insect haemoglobin CTT VIIB (Erythrocruorin) from Chironomus thummi thummi, Diptera].

Authors:  D Sladić-Simić; T Kleinschmidt; G Braunitzer
Journal:  Hoppe Seylers Z Physiol Chem       Date:  1979-02

8.  The analysis of a protein-polymorphism. Evolution of monomeric and homodimeric haemoglobins (erythrocruorins) of Chironomus thummi thummi (Insecta, Diptera).

Authors:  M Goodman; G Braunitzer; T Kleinschmidt; H Aschauer
Journal:  Hoppe Seylers Z Physiol Chem       Date:  1983-03

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Fat body: a site of hemoglobin synthesis in Chironomus thummi (diptera).

Authors:  G Bergtrom; H Laufer; R Rogers
Journal:  J Cell Biol       Date:  1976-05       Impact factor: 10.539

View more
  3 in total

1.  Extracting protein alignment models from the sequence database.

Authors:  A F Neuwald; J S Liu; D J Lipman; C E Lawrence
Journal:  Nucleic Acids Res       Date:  1997-05-01       Impact factor: 16.971

2.  Genomic basis of ecological niche divergence among cryptic sister species of non-biting midges.

Authors:  Hanno Schmidt; Bastian Greshake; Barbara Feldmeyer; Thomas Hankeln; Markus Pfenninger
Journal:  BMC Genomics       Date:  2013-06-10       Impact factor: 3.969

3.  The Globin Gene Family in Arthropods: Evolution and Functional Diversity.

Authors:  Andreas Prothmann; Federico G Hoffmann; Juan C Opazo; Peter Herbener; Jay F Storz; Thorsten Burmester; Thomas Hankeln
Journal:  Front Genet       Date:  2020-08-13       Impact factor: 4.599

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.