Literature DB >> 8524659

The Xenopus intron-encoded U17 snoRNA is produced by exonucleolytic processing of its precursor in oocytes.

F Cecconi1, P Mariottini, F Amaldi.   

Abstract

U17 is a small nucleolar RNA encoded in the introns of the Xenopus laevis gene for ribosomal protein S7 (formerly S8, see Note). To study the mechanisms involved in its in vivo processing from S7 transcripts, various in vitro synthesized RNAs embedding a U17 sequence have been microinjected into the germinal vesicle of Xenopus oocytes and their processing analysed. In particular, the Xenopus U17 gene copies a and f and a U17 gene copy from the pufferfish Fugu rubripes have been used. Information about the nature of the processing activities involved in U17 RNA maturation have been sought by injecting transcripts protected from exonucleolytic attack at their 5'-end by capping and/or lengthened at their 3'-end by polyadenylation. The results obtained indicate that U17 RNA processing is a splicing-independent event and that it is mostly or entirely due to exonucleolytic degradation at both the 5'- and 3'-ends of the precursor molecules. Moreover, it is concluded that the enzymes involved are of the processive type. It is suggested that the apparatus for U17 RNA processing is that responsible for the degradation of all excised and debranched introns. Protection from exonucleolytic attack, due to the tight structure and/or to the binding of specific proteins, would be the mechanism by which U17 RNA is produced.

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 8524659      PMCID: PMC307442          DOI: 10.1093/nar/23.22.4670

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  29 in total

1.  Preparation of synthetic mRNAs and analyses of translational efficiency in microinjected Xenopus oocytes.

Authors:  M Wormington
Journal:  Methods Cell Biol       Date:  1991       Impact factor: 1.441

2.  Synthesis of long, capped transcripts in vitro by SP6 and T7 RNA polymerases.

Authors:  J K Yisraeli; D A Melton
Journal:  Methods Enzymol       Date:  1989       Impact factor: 1.600

3.  Exonucleolytic processing of small nucleolar RNAs from pre-mRNA introns.

Authors:  T Kiss; W Filipowicz
Journal:  Genes Dev       Date:  1995-06-01       Impact factor: 11.361

4.  Three small nucleolar RNAs of unique nucleotide sequences.

Authors:  E A Ruff; O J Rimoldi; B Raghu; G L Eliceiri
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-15       Impact factor: 11.205

5.  Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.

Authors:  D A Melton; P A Krieg; M R Rebagliati; T Maniatis; K Zinn; M R Green
Journal:  Nucleic Acids Res       Date:  1984-09-25       Impact factor: 16.971

6.  Ribosomal protein production in normal and anucleolate Xenopus embryos: regulation at the posttranscriptional and translational levels.

Authors:  P Pierandrei-Amaldi; E Beccari; I Bozzoni; F Amaldi
Journal:  Cell       Date:  1985-08       Impact factor: 41.582

7.  Messenger RNA for ribosomal proteins in Xenopus laevis oocytes.

Authors:  P Pierandrei-Amaldi; E Beccari
Journal:  Eur J Biochem       Date:  1980-05

8.  Expression of two Xenopus laevis ribosomal protein genes in injected frog oocytes. A specific splicing block interferes with the L1 RNA maturation.

Authors:  I Bozzoni; P Fragapane; F Annesi; P Pierandrei-Amaldi; F Amaldi; E Beccari
Journal:  J Mol Biol       Date:  1984-12-25       Impact factor: 5.469

9.  Mouse U14 snRNA is a processed intron of the cognate hsc70 heat shock pre-messenger RNA.

Authors:  R D Leverette; M T Andrews; E S Maxwell
Journal:  Cell       Date:  1992-12-24       Impact factor: 41.582

Review 10.  Poly(A), poly(A) binding protein and the regulation of mRNA stability.

Authors:  P Bernstein; J Ross
Journal:  Trends Biochem Sci       Date:  1989-09       Impact factor: 13.807

View more
  20 in total

1.  Box H and box ACA are nucleolar localization elements of U17 small nucleolar RNA.

Authors:  T S Lange; M Ezrokhi; F Amaldi; S A Gerbi
Journal:  Mol Biol Cell       Date:  1999-11       Impact factor: 4.138

2.  Splicing-independent processing of plant box C/D and box H/ACA small nucleolar RNAs.

Authors:  D J Leader; G P Clark; J Watters; A F Beven; P J Shaw; J W Brown
Journal:  Plant Mol Biol       Date:  1999-04       Impact factor: 4.076

3.  Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability.

Authors:  D L Lafontaine; D Tollervey
Journal:  RNA       Date:  1999-03       Impact factor: 4.942

4.  Structural and sequence evolution of U17 small nucleolar RNA (snoRNA) and its phylogenetic congruence in chelonians.

Authors:  Manuela Cervelli; Marco Oliverio; Alessandro Bellini; Marco Bologna; Francesco Cecconi; Paolo Mariottini
Journal:  J Mol Evol       Date:  2003-07       Impact factor: 2.395

5.  Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast.

Authors:  L H Qu; A Henras; Y J Lu; H Zhou; W X Zhou; Y Q Zhu; J Zhao; Y Henry; M Caizergues-Ferrer; J P Bachellerie
Journal:  Mol Cell Biol       Date:  1999-02       Impact factor: 4.272

6.  The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5'-terminal oligopyrimidine gene family.

Authors:  P Pelczar; W Filipowicz
Journal:  Mol Cell Biol       Date:  1998-08       Impact factor: 4.272

7.  Processing of the precursors to small nucleolar RNAs and rRNAs requires common components.

Authors:  E Petfalski; T Dandekar; Y Henry; D Tollervey
Journal:  Mol Cell Biol       Date:  1998-03       Impact factor: 4.272

8.  A functional role for some Fugu introns larger than the typical short ones: the example of the gene coding for ribosomal protein S7 and snoRNA U17.

Authors:  F Cecconi; C Crosio; P Mariottini; G Cesareni; M Giorgi; S Brenner; F Amaldi
Journal:  Nucleic Acids Res       Date:  1996-08-15       Impact factor: 16.971

9.  Evidence that two latency-associated transcripts of herpes simplex virus type 1 are nonlinear.

Authors:  T T Wu; Y H Su; T M Block; J M Taylor
Journal:  J Virol       Date:  1996-09       Impact factor: 5.103

10.  In vitro assembly of the mouse U14 snoRNP core complex and identification of a 65-kDa box C/D-binding protein.

Authors:  N J Watkins; D R Newman; J F Kuhn; E S Maxwell
Journal:  RNA       Date:  1998-05       Impact factor: 4.942

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.