Literature DB >> 7498758

Statistical methods for linkage analysis of complex traits from high-resolution maps of identity by descent.

J Dupuis1, P O Brown, D Siegmund.   

Abstract

A multilocus model for complex traits is described that generalizes the additive and multiplicative models and hence allows simultaneously for both heterogeneity and gene interaction (epistasis). Statistical methods of linkage analysis are discussed under the assumption that identity by descent data from a dense set of polymorphic markers are available. Three methods, single locus search, simultaneous search and conditional search, are described and compared.

Mesh:

Year:  1995        PMID: 7498758      PMCID: PMC1206656     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  12 in total

1.  A simple regression method for mapping quantitative trait loci in line crosses using flanking markers.

Authors:  C S Haley; S A Knott
Journal:  Heredity (Edinb)       Date:  1992-10       Impact factor: 3.821

2.  Linkage strategies for genetically complex traits. II. The power of affected relative pairs.

Authors:  N Risch
Journal:  Am J Hum Genet       Date:  1990-02       Impact factor: 11.025

3.  Mapping mendelian factors underlying quantitative traits using RFLP linkage maps.

Authors:  E S Lander; D Botstein
Journal:  Genetics       Date:  1989-01       Impact factor: 4.562

4.  Frequency in relatives for an all-or-none trait.

Authors:  J W James
Journal:  Ann Hum Genet       Date:  1971-07       Impact factor: 1.670

5.  Interval mapping of multiple quantitative trait loci.

Authors:  R C Jansen
Journal:  Genetics       Date:  1993-09       Impact factor: 4.562

6.  Gaussian models for genetic linkage analysis using complete high-resolution maps of identity by descent.

Authors:  E Feingold; P O Brown; D Siegmund
Journal:  Am J Hum Genet       Date:  1993-07       Impact factor: 11.025

Review 7.  Genetic dissection of complex traits.

Authors:  E S Lander; N J Schork
Journal:  Science       Date:  1994-09-30       Impact factor: 47.728

8.  Two-locus disease models with two marker loci: the power of affected-sib-pair tests.

Authors:  M Knapp; S A Seuchter; M P Baur
Journal:  Am J Hum Genet       Date:  1994-11       Impact factor: 11.025

9.  Some epistatic two-locus models of disease. I. Relative risks and identity-by-descent distributions in affected sib pairs.

Authors:  S E Hodge
Journal:  Am J Hum Genet       Date:  1981-05       Impact factor: 11.025

10.  Homozygosity mapping: a way to map human recessive traits with the DNA of inbred children.

Authors:  E S Lander; D Botstein
Journal:  Science       Date:  1987-06-19       Impact factor: 47.728

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  22 in total

1.  Multilocus linkage tests based on affected relative pairs.

Authors:  H J Cordell; G C Wedig; K B Jacobs; R C Elston
Journal:  Am J Hum Genet       Date:  2000-03-21       Impact factor: 11.025

2.  Linkage analysis in the presence of errors IV: joint pseudomarker analysis of linkage and/or linkage disequilibrium on a mixture of pedigrees and singletons when the mode of inheritance cannot be accurately specified.

Authors:  H H Göring; J D Terwilliger
Journal:  Am J Hum Genet       Date:  2000-03-23       Impact factor: 11.025

3.  Linkage analysis in the presence of errors III: marker loci and their map as nuisance parameters.

Authors:  H H Göring; J D Terwilliger
Journal:  Am J Hum Genet       Date:  2000-03-23       Impact factor: 11.025

4.  Linkage analysis in the presence of errors I: complex-valued recombination fractions and complex phenotypes.

Authors:  H H Göring; J D Terwilliger
Journal:  Am J Hum Genet       Date:  2000-03       Impact factor: 11.025

5.  Parametric and nonparametric multipoint linkage analysis with imprinting and two-locus-trait models: application to mite sensitization.

Authors:  K Strauch; R Fimmers; T Kurz; K A Deichmann; T F Wienker; M P Baur
Journal:  Am J Hum Genet       Date:  2000-05-04       Impact factor: 11.025

6.  Trimming, weighting, and grouping SNPs in human case-control association studies.

Authors:  J Hoh; A Wille; J Ott
Journal:  Genome Res       Date:  2001-12       Impact factor: 9.043

7.  False discovery rate in linkage and association genome screens for complex disorders.

Authors:  Chiara Sabatti; Susan Service; Nelson Freimer
Journal:  Genetics       Date:  2003-06       Impact factor: 4.562

8.  Biography of David O. Siegmund.

Authors:  David Appell
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-17       Impact factor: 11.205

9.  Novel analytical methods applied to type 1 diabetes genome-scan data.

Authors:  Flemming Pociot; Allan E Karlsen; Claus B Pedersen; Mogens Aalund; Jørn Nerup
Journal:  Am J Hum Genet       Date:  2004-03-11       Impact factor: 11.025

Review 10.  Linkage analysis in the next-generation sequencing era.

Authors:  Joan E Bailey-Wilson; Alexander F Wilson
Journal:  Hum Hered       Date:  2011-12-23       Impact factor: 0.444

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