Literature DB >> 7197547

Theory for nuclear magnetic relaxation of probes in anisotropic systems: application of cholesterol in phospholipid vesicles.

J R Brainard, A Szabo.   

Abstract

The nuclear magnetic relaxation of a nucleus in a cylindrical probe embedded in a bilayer vesicle is considered. The probe is assumed to diffuse freely about its unique (C infinity) symmetry axis with an effective correlation time tau parallel, and the C infinity axis moves in a potential which is azimuthally symmetric about a director, with an effective correlation time tau perpendicular. The overall isotropic rotational correlation time of the membrane is tau M. Dipolar relaxation and, in the special case that the relevant tensors are axially symmetric, quadrupolar and chemical shift anisotropy relaxation are treated. An expression for the appropriate correlation function is derived which depends on the above effective correlation times, on the order parameter of the C infinity axis of the probe, and on the angle (beta) which in the case of dipolar relaxation of a protonated 13 C nucleus is between the 13 C-H vector and the C infinity axis of the probe. A significant feature of this formulation of the dynamics is that no assumptions need be made concerning the relative order of magnitudes of the effective correlation times and the Larmor frequencies (e.g., such as the extreme narrowing limit). The model not only can be used to describe the dynamics of probes such as cholesterol in membranes but also is applicable to certain anisotropic internal motions in proteins. In addition, by allowing the angle beta to fluctuate, a simple model for segmental motion in lipid molecules can be obtained. As an application, 13 C nuclear magnetic relaxation experiments on cholesterol in sonicated egg yolk phosphatidylcholine vesicles are interpreted within the framework of the model. The remarkable observation that the protonated C6 carbon has a line width which is much narrower than those of other methine carbons and is in fact comparable to the line width of the nonprotonated C5 carbon is shown to be the consequence of (1) the anisotropic nature of the cholesterol motion in the bilayer and (2) the fact that angle between the 13 C6-H vector and the long axis of cholesterol is very close to the "magic" value of 54.7 degrees.

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Year:  1981        PMID: 7197547     DOI: 10.1021/bi00519a016

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

Review 1.  Structural dynamics of bio-macromolecules by NMR: the slowly relaxing local structure approach.

Authors:  Eva Meirovitch; Yury E Shapiro; Antonino Polimeno; Jack H Freed
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05       Impact factor: 9.795

2.  Classic Analysis of Biopolymer Dynamics Is Model Free.

Authors:  R Bryn Fenwick; H Jane Dyson
Journal:  Biophys J       Date:  2016-01-05       Impact factor: 4.033

3.  Proton-evolved local-field solid-state NMR studies of cytochrome b5 embedded in bicelles, revealing both structural and dynamical information.

Authors:  Ronald Soong; Pieter E S Smith; Jiadi Xu; Kazutoshi Yamamoto; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

4.  An improved picture of methyl dynamics in proteins from slowly relaxing local structure analysis of 2H spin relaxation.

Authors:  Eva Meirovitch; Yury E Shapiro; Antonino Polimeno; Jack H Freed
Journal:  J Phys Chem B       Date:  2007-10-17       Impact factor: 2.991

5.  Propagation of experimental uncertainties using the Lipari-Szabo model-free analysis of protein dynamics.

Authors:  D Jin; M Andrec; G T Montelione; R M Levy
Journal:  J Biomol NMR       Date:  1998-11       Impact factor: 2.835

6.  Time-averaged order parameter restraints in molecular dynamics simulations.

Authors:  Niels Hansen; Fabian Heller; Nathan Schmid; Wilfred F van Gunsteren
Journal:  J Biomol NMR       Date:  2014-10-14       Impact factor: 2.835

7.  Influence of the long-chain/short-chain amphiphile ratio on lateral diffusion of PEG-lipid in magnetically aligned lipid bilayers as measured via pulsed-field-gradient NMR.

Authors:  Ronald Soong; Peter M Macdonald
Journal:  Biophys J       Date:  2005-07-01       Impact factor: 4.033

8.  INEPT-based separated-local-field NMR spectroscopy: a unique approach to elucidate side-chain dynamics of membrane-associated proteins.

Authors:  Jiadi Xu; Ronald Soong; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2010-07-28       Impact factor: 15.419

9.  Probing the Binding Modes of a Multidomain Protein to Lipid-based Nanoparticles by Relaxation-based NMR.

Authors:  Alberto Ceccon; Vitali Tugarinov; Andrew J Boughton; David Fushman; G Marius Clore
Journal:  J Phys Chem Lett       Date:  2017-05-24       Impact factor: 6.475

10.  New view of lipid bilayer dynamics from 2H and 13C NMR relaxation time measurements.

Authors:  M F Brown; A A Ribeiro; G D Williams
Journal:  Proc Natl Acad Sci U S A       Date:  1983-07       Impact factor: 11.205

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