Literature DB >> 718881

Circular dichroism of squid rhodopsin and its intermediates.

Y Shichida, F Tokunaga, T Yoshizawa.   

Abstract

Circular dichroism (CD) and absorption spectra of squid (Todarodes pacificus) rhodopsin, isorhodopsin and the intermediates was measured at low temperatures. Squid rhodopsin has positive CD bands at wavelengths corresponding the alpha- and beta-absorption bands at liquid nitrogen temperature (CD maxima: 485 nm at alpha-band and 348 nm at beta-band) as well as at room temperature (CD maxima: 474 nm at alpha-band and 347 nm at beta-band). The rotational strength of the alpha-band has a molecular ellipticity about twice that of cattle rhodopsin. The CD spectrum of bathorhodopsin displays a negative peak at 532 nm, the rotational strength of which has an absolute value slightly larger than that of rhodopsin. The reversal in sign at alpha-band of the CD spectrum may indicate that the isomerization of retinal chromophore from twisted 11-cis form to twisted 11-trans form has occurred in the process of conversion from rhodopsin to bathorhodopsin. Lumirhodopsin has a small negative CD band at 490 nm, the maximum of which lies at 25 nm shorter wavelengths than the absorption maximum (515 nm), and a large positive CD band near 290 nm, which is not observed in rhodopsin and the other intermediates. This band may de derived from a conformational change of the opsin. In the process of changing from lumirhodopsin to LM-rhodopsin, The CD bands at visible and near ultraviolet regions disappear. Both alkaline and acid metarhodopsins have no CD bands at visible and near ultraviolet regions.

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Year:  1978        PMID: 718881     DOI: 10.1016/0005-2728(78)90064-6

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  11 in total

1.  Photochemical nature of parietopsin.

Authors:  Kazumi Sakai; Yasushi Imamoto; Chih-Ying Su; Hisao Tsukamoto; Takahiro Yamashita; Akihisa Terakita; King-Wai Yau; Yoshinori Shichida
Journal:  Biochemistry       Date:  2012-02-23       Impact factor: 3.162

2.  Drawing the Retinal Out of Its Comfort Zone: An ONIOM(QM/MM) Study of Mutant Squid Rhodopsin.

Authors:  Sivakumar Sekharan; Keiji Morokuma
Journal:  J Phys Chem Lett       Date:  2010-01-21       Impact factor: 6.475

3.  Quantum mechanical/molecular mechanical structure, enantioselectivity, and spectroscopy of hydroxyretinals and insights into the evolution of color vision in small white butterflies.

Authors:  Sivakumar Sekharan; Shozo Yokoyama; Keiji Morokuma
Journal:  J Phys Chem B       Date:  2011-12-06       Impact factor: 2.991

4.  QM/MM study of dehydro and dihydro β-ionone retinal analogues in squid and bovine rhodopsins: implications for vision in salamander rhodopsin.

Authors:  Sivakumar Sekharan; Ahmet Altun; Keiji Morokuma
Journal:  J Am Chem Soc       Date:  2010-10-21       Impact factor: 15.419

5.  Why 11-cis-retinal? Why not 7-cis-, 9-cis-, or 13-cis-retinal in the eye?

Authors:  Sivakumar Sekharan; Keiji Morokuma
Journal:  J Am Chem Soc       Date:  2011-11-03       Impact factor: 15.419

6.  QM/MM study of the structure, energy storage, and origin of the bathochromic shift in vertebrate and invertebrate bathorhodopsins.

Authors:  Sivakumar Sekharan; Keiji Morokuma
Journal:  J Am Chem Soc       Date:  2011-03-10       Impact factor: 15.419

7.  Photoisomerization mechanism of the rhodopsin chromophore: picosecond photolysis of pigment containing 11-cis-locked eight-membered ring retinal.

Authors:  T Mizukami; H Kandori; Y Shichida; A H Chen; F Derguini; C G Caldwell; C F Biffe; K Nakanishi; T Yoshizawa
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

8.  The molecular structure of a curl-shaped retinal isomer.

Authors:  Robert Send; Dage Sundholm
Journal:  J Mol Model       Date:  2008-03-20       Impact factor: 1.810

9.  Photochemistry of visual pigment in a G(q) protein-coupled receptor (GPCR)--insights from structural and spectral tuning studies on squid rhodopsin.

Authors:  Sivakumar Sekharan; Ahmet Altun; Keiji Morokuma
Journal:  Chemistry       Date:  2010-02-08       Impact factor: 5.236

10.  Primary photochemistry and photoisomerization of retinal at 77 degrees K in cattle and squid rhodopsins.

Authors:  T Suzuki; R H Callender
Journal:  Biophys J       Date:  1981-05       Impact factor: 4.033

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