Literature DB >> 8483923

Photoisomerization mechanism of the rhodopsin chromophore: picosecond photolysis of pigment containing 11-cis-locked eight-membered ring retinal.

T Mizukami1, H Kandori, Y Shichida, A H Chen, F Derguini, C G Caldwell, C F Biffe, K Nakanishi, T Yoshizawa.   

Abstract

The primary photochemical event in rhodopsin is an 11-cis to 11-trans photoisomerization of its retinylidene chromophore to form the primary intermediate photorhodopsin. Earlier picosecond studies have shown that no intermediate is formed when the retinal 11-ene is fixed through a bridging five-membered ring, whereas a photorhodopsin-like intermediate is formed when it is fixed through a flexible seven-membered ring. Results from a rhodopsin analog formed from a retinal with locked 11-ene structure through the more flexible eight-membered ring (Ret8) are described. Incubation of bovine opsin with Ret8 formed two pigments absorbing at 425 nm (P425) and 500 nm (P500). P425, however, is an artifact because it formed from thermally denatured opsin or other proteins and Ret8. Excitation of P500 with a picosecond green pulse led to formation of two intermediates corresponding to photo- and bathorhodopsins. These results demonstrate that an appearance of early intermediates is dependent on the flexibility of the 11-ene and that the photoisomerization of P500 proceeds by stepwise changes of chromophore-protein interaction, which in turn leads to a relaxation of the highly twisted all-trans-retinylidene chromophore in photorhodopsin.

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Year:  1993        PMID: 8483923      PMCID: PMC46448          DOI: 10.1073/pnas.90.9.4072

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Pre-lumirhodopsin and the bleaching of visual pigments.

Authors:  T YOSHIZAWA; G WALD
Journal:  Nature       Date:  1963-03-30       Impact factor: 49.962

2.  Existence of a beta-ionone ring-binding site in the rhodopsin molecule.

Authors:  H Matsumoto; T Yoshizawa
Journal:  Nature       Date:  1975-12-11       Impact factor: 49.962

3.  Dependency of photon density on primary process of cattle rhodopsin.

Authors:  H Kandori; S Matuoka; Y Shichida; T Yoshizawa
Journal:  Photochem Photobiol       Date:  1989-02       Impact factor: 3.421

4.  The molecular basis of visual excitation.

Authors:  G Wald
Journal:  Nature       Date:  1968-08-24       Impact factor: 49.962

5.  Assignment and interpretation of hydrogen out-of-plane vibrations in the resonance Raman spectra of rhodopsin and bathorhodopsin.

Authors:  G Eyring; B Curry; A Broek; J Lugtenburg; R Mathies
Journal:  Biochemistry       Date:  1982-01-19       Impact factor: 3.162

6.  Circular dichroism of squid rhodopsin and its intermediates.

Authors:  Y Shichida; F Tokunaga; T Yoshizawa
Journal:  Biochim Biophys Acta       Date:  1978-12-07

7.  Circular dichroism of cattle rhodopsin and bathorhodopsin at liquid nitrogen temperatures.

Authors:  S Horiuchi; F Tokunaga; T Yoshizawa
Journal:  Biochim Biophys Acta       Date:  1980-07-08

8.  Recognition of opsin to the longitudinal length of retinal isomers in the formation of rhodopsin.

Authors:  H Matsumoto; T Yoshizawa
Journal:  Vision Res       Date:  1978       Impact factor: 1.886

9.  Fourier-transform infrared difference spectroscopy of rhodopsin and its photoproducts at low temperature.

Authors:  K A Bagley; V Balogh-Nair; A A Croteau; G Dollinger; T G Ebrey; L Eisenstein; M K Hong; K Nakanishi; J Vittitow
Journal:  Biochemistry       Date:  1985-10-22       Impact factor: 3.162

10.  Electrostatic interaction between retinylidene chromophore and opsin in rhodopsin studied by fluorinated rhodopsin analogues.

Authors:  Y Shichida; T Ono; T Yoshizawa; H Matsumoto; A E Asato; J P Zingoni; R S Liu
Journal:  Biochemistry       Date:  1987-07-14       Impact factor: 3.162

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  6 in total

1.  The molecular basis for the high photosensitivity of rhodopsin.

Authors:  Robert S H Liu; Leticia U Colmenares
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-01       Impact factor: 11.205

2.  Resonance Raman Structural Evidence that the Cis-to-Trans Isomerization in Rhodopsin Occurs in Femtoseconds.

Authors:  J E Kim; D W McCamant; L Zhu; R A Mathies
Journal:  J Phys Chem B       Date:  2001-02-15       Impact factor: 2.991

Review 3.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

4.  Volume and enthalpy changes after photoexcitation of bovine rhodopsin: laser-induced optoacoustic studies.

Authors:  J M Strassburger; W Gärtner; S E Braslavsky
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

5.  Primary picosecond molecular events in the photoreaction of the BR5.12 artificial bacteriorhodopsin pigment.

Authors:  J K Delaney; T L Brack; G H Atkinson; M Ottolenghi; G Steinberg; M Sheves
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-14       Impact factor: 11.205

6.  Origin of the low thermal isomerization rate of rhodopsin chromophore.

Authors:  Masataka Yanagawa; Keiichi Kojima; Takahiro Yamashita; Yasushi Imamoto; Take Matsuyama; Koji Nakanishi; Yumiko Yamano; Akimori Wada; Yasushi Sako; Yoshinori Shichida
Journal:  Sci Rep       Date:  2015-06-10       Impact factor: 4.379

  6 in total

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