Literature DB >> 7142835

Dynamic stability of steady states and static stabilization in unbranched metabolic pathways.

B F Dibrov, A M Zhabotinsky, B N Kholodenko.   

Abstract

The paper is concerned with the conditions of dynamic (asymptotic) stability of steady states in unbranched metabolic pathways. The stationary flux in such pathways is generally determined by the concentration of the end product due to the effector action of this product on the reactions proceeding in its synthetic pathway. The delay in feedback circuits causes violation of dynamic stability at large static stabilization factors. A methods permitting analytic estimation of the critical stabilization factor is suggested. Sufficient and necessary conditions for asymptotic stability of the steady state in the general case of the pathway with a single feedback loop have been established. Mechanisms for maintenance of the steady state asymptotic stability at large static stabilization factors are studied. It has been shown that the range of dynamic stability can be widened greatly, if the pathway contains one or two reactions (but not more) of relatively small effective rate constants. Short strong negative feedback is also found to extend considerably the range of dynamic stability of the pathway. The feedback is more effective if it acts on the reaction with small effective rate constant.

Mesh:

Year:  1982        PMID: 7142835     DOI: 10.1007/bf00275788

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  9 in total

1.  Optimal design of feedback control by inhibition: dynamic considerations.

Authors:  M A Savageau
Journal:  J Mol Evol       Date:  1975-08-05       Impact factor: 2.395

2.  The qualitative dynamics of a class of biochemical control circuits.

Authors:  H G Othmer
Journal:  J Math Biol       Date:  1976-04-29       Impact factor: 2.259

3.  Limit-cycles in enzyme-systems with nonlinear negative feedback.

Authors:  A Hunding
Journal:  Biophys Struct Mech       Date:  1974-10-28

4.  The energy charge of the adenylate pool as a regulatory parameter. Interaction with feedback modifiers.

Authors:  D E Atkinson
Journal:  Biochemistry       Date:  1968-11       Impact factor: 3.162

5.  The occurrence and the significance of limit cycle behavior in controlled biochemical systems.

Authors:  C F Walter
Journal:  J Theor Biol       Date:  1970-05       Impact factor: 2.691

6.  Stability of controlled biological systems.

Authors:  C Walter
Journal:  J Theor Biol       Date:  1969-04       Impact factor: 2.691

7.  [Dynamic stability and parametric stabilization of steady states of unbranched metabolic pathways].

Authors:  B F Dibrov; A M Zhabotinskiĭ; B N Kholodenko
Journal:  Biofizika       Date:  1981 Sep-Oct

8.  [Dynamic stability of a metabolic pathway with single-loop feedback].

Authors:  B F Dibrov; A M Zhabotinskiĭ; B N Kholodenko
Journal:  Biofizika       Date:  1981 Jul-Aug

9.  The regulation of glycolysis in human erythrocytes. The dependence of the glycolytic flux on the ATP concentration.

Authors:  F I Ataullakhanov; V M Vitvitsky; A M Zhabotinsky; A V Pichugin; O V Platonova; B N Kholodenko; L I Ehrlich
Journal:  Eur J Biochem       Date:  1981-04
  9 in total
  7 in total

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2.  Minimization of intermediate concentrations as a suggested optimality principle for biochemical networks. II. Time hierarchy, enzymatic rate laws, and erythrocyte metabolism.

Authors:  S Schuster; R Schuster; R Heinrich
Journal:  J Math Biol       Date:  1991       Impact factor: 2.259

Review 3.  Four-dimensional dynamics of MAPK information processing systems.

Authors:  Boris N Kholodenko; Marc R Birtwistle
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2009 Jul-Aug

4.  Encoding NF-kappaB temporal control in response to TNF: distinct roles for the negative regulators IkappaBalpha and A20.

Authors:  Shannon L Werner; Jeffrey D Kearns; Victoria Zadorozhnaya; Candace Lynch; Ellen O'Dea; Mark P Boldin; Averil Ma; David Baltimore; Alexander Hoffmann
Journal:  Genes Dev       Date:  2008-08-01       Impact factor: 11.361

5.  Automated ensemble modeling with modelMaGe: analyzing feedback mechanisms in the Sho1 branch of the HOG pathway.

Authors:  Jörg Schaber; Max Flöttmann; Jian Li; Carl-Fredrik Tiger; Stefan Hohmann; Edda Klipp
Journal:  PLoS One       Date:  2011-03-30       Impact factor: 3.240

6.  A systematic analysis of signaling reactivation and drug resistance.

Authors:  Boris N Kholodenko; Nora Rauch; Walter Kolch; Oleksii S Rukhlenko
Journal:  Cell Rep       Date:  2021-05-25       Impact factor: 9.423

7.  DYVIPAC: an integrated analysis and visualisation framework to probe multi-dimensional biological networks.

Authors:  Lan K Nguyen; Andrea Degasperi; Philip Cotter; Boris N Kholodenko
Journal:  Sci Rep       Date:  2015-07-29       Impact factor: 4.379

  7 in total

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