Literature DB >> 1159800

Optimal design of feedback control by inhibition: dynamic considerations.

M A Savageau.   

Abstract

The local stability of unbranched biosynthetic pathways is examined by mathematical analysis and computer simulation using a novel nonlinear formalism that appears to accurately describe biochemical systems. Four factors affecting the stability are examined: strength of feedback inhibition, equalization of the values among the corresponding kinetic parameters for the reactions of the pathway, pathway length, and alternative patterns of feedback interactions. The strength of inhibition and the pattern of feedback interactions are important determinants of steady-state behavior. The simple pattern of end-product inhibition in unbranched pathways may have evolved because it optimizes the steady-state behavior and is temporally most responsive to change. Stability in these simple systems is achieved by shortening pathway length either physically or, in the case of necessarily long pathways, kinetically by a wide devergence in the values of the corresponding kinetic parameters for the reactions of the pathway. These conclusions are discussed in the light of available experimental evidence.

Mesh:

Year:  1975        PMID: 1159800     DOI: 10.1007/bf01741242

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  15 in total

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5.  Limit-cycles in enzyme-systems with nonlinear negative feedback.

Authors:  A Hunding
Journal:  Biophys Struct Mech       Date:  1974-10-28

6.  Optimal design of feedback control by inhibition.

Authors:  M A Savageau
Journal:  J Mol Evol       Date:  1974-11-29       Impact factor: 2.395

Review 7.  The catalytic and regulatory properties of enzymes.

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Authors:  M A Savageau
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Authors:  C F Walter
Journal:  J Theor Biol       Date:  1970-05       Impact factor: 2.691

10.  Some dynamic properties of linear, hyperbolic and sigmoidal multi-enzyme systems with feedback control.

Authors:  C F Walter
Journal:  J Theor Biol       Date:  1974-04       Impact factor: 2.691

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  27 in total

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5.  Phenotypic deconstruction of gene circuitry.

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6.  Bacterial quorum sensing and metabolic slowing in a cooperative population.

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7.  A theoretical approach to the evolution and structural design of enzymatic networks: linear enzymatic chains, branched pathways and glycolysis of erythrocytes.

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Journal:  Bull Math Biol       Date:  1987       Impact factor: 1.758

8.  Genetic-algorithm selection of a regulatory structure that directs flux in a simple metabolic model.

Authors:  A Gilman; J Ross
Journal:  Biophys J       Date:  1995-10       Impact factor: 4.033

9.  Structure identifiability in metabolic pathways: parameter estimation in models based on the power-law formalism.

Authors:  A Sorribas; M Cascante
Journal:  Biochem J       Date:  1994-03-01       Impact factor: 3.857

10.  Modeling the role of covalent enzyme modification in Escherichia coli nitrogen metabolism.

Authors:  Philip B Kidd; Ned S Wingreen
Journal:  Phys Biol       Date:  2010-01-07       Impact factor: 2.583

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