Literature DB >> 6546433

A DNA sequence analysis package for the IBM personal computer.

L M Lagrimini, S T Brentano, J E Donelson.   

Abstract

We present here a collection of DNA sequence analysis programs, called "PC Sequence" (PCS), which are designed to run on the IBM Personal Computer (PC). These programs are written in IBM PC compiled BASIC and take full advantage of the IBM PC's speed, error handling, and graphics capabilities. For a modest initial expense in hardware any laboratory can use these programs to quickly perform computer analysis on DNA sequences. They are written with the novice user in mind and require very little training or previous experience with computers. Also provided are a text editing program for creating and modifying DNA sequence files and a communications program which enables the PC to communicate with and collect information from mainframe computers and DNA sequence databases.

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Year:  1984        PMID: 6546433      PMCID: PMC321074          DOI: 10.1093/nar/12.1part2.605

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  6 in total

1.  Rorvik disowned.

Authors:  Michael D Stein
Journal:  Nature       Date:  1982-04-22       Impact factor: 49.962

2.  Computer analysis of nucleic acids and proteins.

Authors:  C L Queen; L J Korn
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

3.  Nucleic acid sequence database computer system.

Authors:  B C Orcutt; D G George; J A Fredrickson; M O Dayhoff
Journal:  Nucleic Acids Res       Date:  1982-01-11       Impact factor: 16.971

4.  Los Alamos sequence analysis package for nucleic acids and proteins.

Authors:  M I Kanehisa
Journal:  Nucleic Acids Res       Date:  1982-01-11       Impact factor: 16.971

5.  Matrix program to analyze primary structure homology.

Authors:  J Novotny
Journal:  Nucleic Acids Res       Date:  1982-01-11       Impact factor: 16.971

6.  Sequence data handling by computer.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1977-11       Impact factor: 16.971

  6 in total
  25 in total

1.  Molecular characterization of the Saccharomyces cerevisiae dihydrofolate reductase gene (DFR1).

Authors:  P A Lagosky; G R Taylor; R H Haynes
Journal:  Nucleic Acids Res       Date:  1987-12-23       Impact factor: 16.971

2.  The roles of indoleglycerol phosphate and the TrpI protein in the expression of trpBA from Pseudomonas aeruginosa.

Authors:  M Chang; I P Crawford
Journal:  Nucleic Acids Res       Date:  1990-02-25       Impact factor: 16.971

3.  DNA sequences and characterization of four early genes of the tryptophan pathway in Pseudomonas aeruginosa.

Authors:  D W Essar; L Eberly; C Y Han; I P Crawford
Journal:  J Bacteriol       Date:  1990-02       Impact factor: 3.490

4.  Unusual sequence conservation in the 5' and 3' untranslated regions of the sea urchin spec mRNAs.

Authors:  P E Hardin; W H Klein
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

5.  Fast analysis of DNA and protein sequence on Apple IIe: restriction sites search, alignment of short sequence and dot matrix analysis.

Authors:  C Marck
Journal:  Nucleic Acids Res       Date:  1986-01-10       Impact factor: 16.971

6.  Sequence of the Pseudomonas aeruginosa trpI activator gene and relatedness of trpI to other procaryotic regulatory genes.

Authors:  M Chang; A Hadero; I P Crawford
Journal:  J Bacteriol       Date:  1989-01       Impact factor: 3.490

7.  An integrated software system for microcomputer management of recombinant DNA data.

Authors:  J Campione-Piccardo; M Ruben
Journal:  Nucleic Acids Res       Date:  1986-01-10       Impact factor: 16.971

8.  DNA sequence analysis of ARS elements from chromosome III of Saccharomyces cerevisiae: identification of a new conserved sequence.

Authors:  T G Palzkill; S G Oliver; C S Newlon
Journal:  Nucleic Acids Res       Date:  1986-08-11       Impact factor: 16.971

9.  The enigma of the gene coding for ribosomal protein S12 in the chloroplasts of Nicotiana.

Authors:  H Fromm; M Edelman; B Koller; P Goloubinoff; E Galun
Journal:  Nucleic Acids Res       Date:  1986-01-24       Impact factor: 16.971

10.  Hemagglutinin-neuraminidase protein of the paramyxovirus simian virus 5: nucleotide sequence of the mRNA predicts an N-terminal membrane anchor.

Authors:  S W Hiebert; R G Paterson; R A Lamb
Journal:  J Virol       Date:  1985-04       Impact factor: 5.103

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