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Literature DB >> 6462693

tRNA-rRNA sequence homologies: a model for the origin of a common ancestral molecule, and prospects for its reconstruction.

D Bloch, B McArthur, R Widdowson, D Spector, R C Guimaraes, J Smith.

Abstract

A model is proposed for the early evolution of the coding mechanism. A primordial RNA embodies the functions of today's nucleic acids in a single molecule. The molecule is generated by successive rounds of self-priming and -templating. After proximity is assured by enclosure in a cell, the functions can be partitioned among more efficient specialized molecules. The prediction of sequence homologies in later forms prompted a search for matches between t- and r-RNAs. These are described. Their distributions offer clues to their origins. The existance of overlapping homologies indicates an approach to the reconstruction of an ancestral molecule.

Entities: Species

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Year: 1984 PMID： 6462693 DOI： 10.1007/bf00933706

Source DB: PubMed Journal: Orig Life ISSN： 0302-1688

11 in total

1. Enzymatic synthesis of deoxyribonucleic acid. XXV. Purification and properties of deoxyribonucleic acid polymerase induced by infection with phage T4.

Authors: M Goulian; Z J Lucas; A Kornberg
Journal: J Biol Chem Date: 1968-02-10 Impact factor: 5.157

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Authors: W M Fitch
Journal: Syst Zool Date: 1970-06

3. Secondary structure of 16S ribosomal RNA.

Authors: H F Noller; C R Woese
Journal: Science Date: 1981-04-24 Impact factor: 47.728

4. Pattern recognition in nucleic acid sequences. I. A general method for finding local homologies and symmetries.

Authors: W B Goad; M I Kanehisa
Journal: Nucleic Acids Res Date: 1982-01-11 Impact factor: 16.971

5. Compilation of tRNA sequences.

Authors: M Sprinzl; D H Gauss
Journal: Nucleic Acids Res Date: 1982-01-22 Impact factor: 16.971

6. Secondary structure comparisons between small subunit ribosomal RNA molecules from six different species.

Authors: C Zwieb; C Glotz; R Brimacombe
Journal: Nucleic Acids Res Date: 1981-08-11 Impact factor: 16.971

7. Internal control regions for transcription of eukaryotic tRNA genes.

Authors: S Sharp; D DeFranco; T Dingermann; P Farrell; D Söll
Journal: Proc Natl Acad Sci U S A Date: 1981-11 Impact factor: 11.205

8. Transfer-RNA, an early gene?

Authors: M Eigen; R Winkler-Oswatitsch
Journal: Naturwissenschaften Date: 1981-06

9. Complete sequence of bovine mitochondrial DNA. Conserved features of the mammalian mitochondrial genome.

Authors: S Anderson; M H de Bruijn; A R Coulson; I C Eperon; F Sanger; I G Young
Journal: J Mol Biol Date: 1982-04-25 Impact factor: 5.469

10. Polynucleotide replication coupled to protein synthesis: a possible mechanism for the origin of life.

Authors: A G Mackinlay
Journal: Orig Life Date: 1982-03

18 in total

1. A self-referential model for the formation of the genetic code.

Authors: Romeu Cardoso Guimarães; Carlos Henrique Costa Moreira; Sávio Torres de Farias
Journal: Theory Biosci Date: 2008-05-21 Impact factor: 1.919

2. More Pieces of Ancient than Recent Theoretical Minimal Proto-tRNA-Like RNA Rings in Genes Coding for tRNA Synthetases.

Authors: Jacques Demongeot; Hervé Seligmann
Journal: J Mol Evol Date: 2019-04-05 Impact factor: 2.395

tRNA-rRNA sequence homologies: a model for the origin of a common ancestral molecule, and prospects for its reconstruction.

1. Enzymatic synthesis of deoxyribonucleic acid. XXV. Purification and properties of deoxyribonucleic acid polymerase induced by infection with phage T4.

2. Distinguishing homologous from analogous proteins.

3. Secondary structure of 16S ribosomal RNA.

4. Pattern recognition in nucleic acid sequences. I. A general method for finding local homologies and symmetries.

5. Compilation of tRNA sequences.

6. Secondary structure comparisons between small subunit ribosomal RNA molecules from six different species.

7. Internal control regions for transcription of eukaryotic tRNA genes.

8. Transfer-RNA, an early gene?

9. Complete sequence of bovine mitochondrial DNA. Conserved features of the mammalian mitochondrial genome.

10. Polynucleotide replication coupled to protein synthesis: a possible mechanism for the origin of life.

1. A self-referential model for the formation of the genetic code.

2. More Pieces of Ancient than Recent Theoretical Minimal Proto-tRNA-Like RNA Rings in Genes Coding for tRNA Synthetases.

3. Cybernetic origins of replication.

4. Detection of a fundamental modular format common to transfer and ribosomal RNAs: second-order spectral analysis.

5. Bijective codon transformations show genetic code symmetries centered on cytosine's coding properties.

6. tRNA-rRNA sequence homologies: evidence for a common evolutionary origin?

7. Three-Dimensional Algebraic Models of the tRNA Code and 12 Graphs for Representing the Amino Acids.

8. Piecemeal Buildup of the Genetic Code, Ribosomes, and Genomes from Primordial tRNA Building Blocks.

9. Evolution of transfer RNA and the origin of the translation system.

10. tRNA Core Hypothesis for the Transition from the RNA World to the Ribonucleoprotein World.