Literature DB >> 6330684

Methylation pattern of mouse mitochondrial DNA.

Y Pollack, J Kasir, R Shemer, S Metzger, M Szyf.   

Abstract

The pattern of methylation of mouse mitochondrial DNA (mtDNA) was studied using several techniques. By employing a sensitive analytical procedure it was possible to show that this DNA contains the modified base 5-methylcytosine (m5Cyt). This residue occurred exclusively at the dinucleotide sequence CpG at a frequency of 3 to 5%. The pattern of methylation was further investigated by determining the state of methylation of several MspI (HpaII) sites. Different sites were found to be methylated to a different extent, implying that methylation of mtDNA is nonrandom. Based on the known base composition and nucleotide sequence of mouse mtDNA, the dinucleotide sequence CpG was found to be underrepresented in this DNA. The features of mtDNA methylation (CpG methylation, partial methylation of specific sites and CpG underrepresentation) are also characteristic of vertebrate nuclear DNA. This resemblance may reflect functional relationship between the mitochondrial and nuclear genomes.

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Year:  1984        PMID: 6330684      PMCID: PMC318881          DOI: 10.1093/nar/12.12.4811

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  49 in total

1.  Enzymatic synthesis of deoxyribonucleic acid. VIII. Frequencies of nearest neighbor base sequences in deoxyribonucleic acid.

Authors:  J JOSSE; A D KAISER; A KORNBERG
Journal:  J Biol Chem       Date:  1961-03       Impact factor: 5.157

2.  The action of pancreatic deoxyribonuclease. II. Isomeric dinucleotides.

Authors:  R L SINSHEIMER
Journal:  J Biol Chem       Date:  1955-08       Impact factor: 5.157

3.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

4.  Differential methylation of mitochondrial and nuclear DNA in cultured mouse, hamster and virus-transformed hamster cells. In vivo and in vitro methylation.

Authors:  M M Nass
Journal:  J Mol Biol       Date:  1973-10-15       Impact factor: 5.469

5.  The nucleotide composition and pyrimidine clusters in DNA from beef heart mitochondria.

Authors:  B F Vanyushin; M D Kirnos
Journal:  FEBS Lett       Date:  1974-02-15       Impact factor: 4.124

6.  Studies on the biological role of dna methylation; IV. Mode of methylation of DNA in E. coli cells.

Authors:  A Razin; S Urieli; Y Pollack; Y Gruenbaum; G Glaser
Journal:  Nucleic Acids Res       Date:  1980-04-25       Impact factor: 16.971

7.  Mitochondrial DNA sequences in the nuclear genome of a locust.

Authors:  G Gellissen; J Y Bradfield; B N White; G R Wyatt
Journal:  Nature       Date:  1983 Feb 17-23       Impact factor: 49.962

8.  Similar genes for a mitochondrial ATPase subunit in the nuclear and mitochondrial genomes of Neurospora crassa.

Authors:  P van den Boogaart; J Samallo; E Agsteribbe
Journal:  Nature       Date:  1982-07-08       Impact factor: 49.962

9.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

10.  DNA methylation and the frequency of CpG in animal DNA.

Authors:  A P Bird
Journal:  Nucleic Acids Res       Date:  1980-04-11       Impact factor: 16.971

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  60 in total

Review 1.  Epigenetics, epidemiology and mitochondrial DNA diseases.

Authors:  Patrick F Chinnery; Hannah R Elliott; Gavin Hudson; David C Samuels; Caroline L Relton
Journal:  Int J Epidemiol       Date:  2012-01-28       Impact factor: 7.196

2.  An analytical pipeline for genomic representations used for cytosine methylation studies.

Authors:  Reid F Thompson; Mark Reimers; Batbayar Khulan; Mathieu Gissot; Todd A Richmond; Quan Chen; Xin Zheng; Kami Kim; John M Greally
Journal:  Bioinformatics       Date:  2008-03-18       Impact factor: 6.937

3.  Age-related accumulation of de novo mitochondrial mutations in mammalian oocytes and somatic tissues.

Authors:  Barbara Arbeithuber; James Hester; Marzia A Cremona; Nicholas Stoler; Arslan Zaidi; Bonnie Higgins; Kate Anthony; Francesca Chiaromonte; Francisco J Diaz; Kateryna D Makova
Journal:  PLoS Biol       Date:  2020-07-15       Impact factor: 8.029

4.  Cellular and viral DNA hypomethylation associated with induction of Epstein-Barr virus lytic cycle.

Authors:  M Szyf; L Eliasson; V Mann; G Klein; A Razin
Journal:  Proc Natl Acad Sci U S A       Date:  1985-12       Impact factor: 11.205

5.  Regionally specific and genome-wide analyses conclusively demonstrate the absence of CpG methylation in human mitochondrial DNA.

Authors:  Elizabeth E Hong; Cindy Y Okitsu; Andrew D Smith; Chih-Lin Hsieh
Journal:  Mol Cell Biol       Date:  2013-05-13       Impact factor: 4.272

Review 6.  A new pathway for mitochondrial quality control: mitochondrial-derived vesicles.

Authors:  Ayumu Sugiura; Gian-Luca McLelland; Edward A Fon; Heidi M McBride
Journal:  EMBO J       Date:  2014-08-08       Impact factor: 11.598

Review 7.  Environmental exposure and mitochondrial epigenetics: study design and analytical challenges.

Authors:  Hyang-Min Byun; Andrea A Baccarelli
Journal:  Hum Genet       Date:  2014-01-09       Impact factor: 4.132

Review 8.  Mitochondrial Epigenetics and Environmental Exposure.

Authors:  Luca Lambertini; Hyang-Min Byun
Journal:  Curr Environ Health Rep       Date:  2016-09

9.  Obesity-associated extracellular mtDNA activates central TGFβ pathway to cause blood pressure increase.

Authors:  Albert Alé; Yalin Zhang; Cheng Han; Dongsheng Cai
Journal:  Am J Physiol Endocrinol Metab       Date:  2016-11-15       Impact factor: 4.310

10.  Detection of Schistosoma mansoni DNA in extracts of whole individual snails by dot hybridization.

Authors:  J Hamburger; M Weil; Y Pollack
Journal:  Parasitol Res       Date:  1987       Impact factor: 2.289

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