Literature DB >> 6321488

High guanine plus cytosine content in the third letter of codons of an extreme thermophile. DNA sequence of the isopropylmalate dehydrogenase of Thermus thermophilus.

Y Kagawa, H Nojima, N Nukiwa, M Ishizuka, T Nakajima, T Yasuhara, T Tanaka, T Oshima.   

Abstract

In studies on the cause of the extreme stability of the macromolecules of Thermus thermophilus HB8, the leuB gene coding for 3-isopropylmalate dehydrogenase of the leucine synthesis pathway and its flanking regions were cloned and sequenced. The leuB gene of T. thermophilus was expressed in a leuB-less mutant of Escherichia coli, and thermostable dehydrogenase was purified from an extract of the cells. The primary structure of the thermophilic isopropylmalate dehydrogenase was deduced from the nucleotide sequence leuB gene (1017 base pairs) and the amino acid sequence of the peptides isolated from the purified dehydrogenase. The thermophilic dehydrogenase has Mr = 35,968, and the value was close to that determined for the monomer of dehydrogenase (36,000) by gel electrophoresis. The molecular weight of active dimeric dehydrogenase was found to be 73,000 by high speed liquid chromatography. The primary structure of dehydrogenase was consistent with the amino acid composition of the dehydrogenase. In contrast to the isopropylmalate dehydrogenase of E. coli which contains 8 cysteine residues, there was no cysteine in thermophilic isopropylmalate dehydrogenase. The 5'-noncoding region contained a typical Shine-Dalgarno sequence. The guanine plus cytosine content of the coding region was 70.1%, and that of the third letter of the codons was extremely high (89.4%).

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Year:  1984        PMID: 6321488

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  61 in total

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Authors:  Christian Marck; Henri Grosjean
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4.  Structure of a bacterial enzyme regulated by phosphorylation, isocitrate dehydrogenase.

Authors:  J H Hurley; P E Thorsness; V Ramalingam; N H Helmers; D E Koshland; R M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

5.  Characterization of an operon encoding succinyl-CoA synthetase and malate dehydrogenase from Thermus flavus AT-62 and its expression in Escherichia coli.

Authors:  M Nishiyama; S Horinouchi; T Beppu
Journal:  Mol Gen Genet       Date:  1991-04

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Authors:  S Osawa; T H Jukes; K Watanabe; A Muto
Journal:  Microbiol Rev       Date:  1992-03

7.  A plot of G + C content against sequence length of 640 bacterial chromosomes shows the points are widely scattered in the upper triangular area.

Authors:  Feng-Biao Guo; Hao Lin; Jian Huang
Journal:  Chromosome Res       Date:  2009-03-13       Impact factor: 5.239

8.  Molecular evolution of maize catalases and their relationship to other eukaryotic and prokaryotic catalases.

Authors:  L Guan; J G Scandalios
Journal:  J Mol Evol       Date:  1996-05       Impact factor: 2.395

9.  Spontaneous tandem sequence duplications reverse the thermal stability of carboxyl-terminal modified 3-isopropylmalate dehydrogenase.

Authors:  S Akanuma; A Yamagishi; N Tanaka; T Oshima
Journal:  J Bacteriol       Date:  1996-11       Impact factor: 3.490

10.  Beyond the Frozen Accident: Glycine Assignment in the Genetic Code.

Authors:  Koji Tamura
Journal:  J Mol Evol       Date:  2015-08-20       Impact factor: 2.395

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