Literature DB >> 6304653

The repeated GC-rich motifs upstream from the TATA box are important elements of the SV40 early promoter.

R D Everett, D Baty, P Chambon.   

Abstract

We have constructed deletion and point mutations within the Simian virus 40 (SV40) early promoter region which contains two tandemly repeated 21 bp sequences and a related 22 bp sequence (the "upstream" 21 bp repeat region). After transfection into permissive CV-1 cells and non-permissive mouse 3T3-4E cells, the effect of the mutations on early gene expression was studied by measuring T-antigen production, using indirect immunofluoresence. Our results demonstrate that the 21 bp repeat region, and in particular the six GC-rich motifs 5'-CCGCCC-3' which are repeated in this region constitute an important element of the SV40 early promoter. Surprisingly, we found that the requirement for the 21 bp repeat region for early gene expression was partially fulfilled even when it was in the inverted orientation.

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Year:  1983        PMID: 6304653      PMCID: PMC325895          DOI: 10.1093/nar/11.8.2447

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  38 in total

1.  The SV40 72 base repair repeat has a striking effect on gene expression both in SV40 and other chimeric recombinants.

Authors:  P Moreau; R Hen; B Wasylyk; R Everett; M P Gaub; P Chambon
Journal:  Nucleic Acids Res       Date:  1981-11-25       Impact factor: 16.971

2.  Identification of a promoter component involved in positioning the 5' termini of simian virus 40 early mRNAs.

Authors:  P K Ghosh; P Lebowitz; R J Frisque; Y Gluzman
Journal:  Proc Natl Acad Sci U S A       Date:  1981-01       Impact factor: 11.205

3.  Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.

Authors:  F Sanger; A R Coulson; B G Barrell; A J Smith; B A Roe
Journal:  J Mol Biol       Date:  1980-10-25       Impact factor: 5.469

4.  In vivo sequence requirements of the SV40 early promotor region.

Authors:  C Benoist; P Chambon
Journal:  Nature       Date:  1981-03-26       Impact factor: 49.962

5.  The SV40 early region TATA box is required for accurate in vitro initiation of transcription.

Authors:  D J Mathis; P Chambon
Journal:  Nature       Date:  1981-03-26       Impact factor: 49.962

6.  Spacer DNA sequences upstream of the T-A-T-A-A-A-T-A sequence are essential for promotion of H2A histone gene transcription in vivo.

Authors:  R Grosschedl; M L Birnstiel
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

7.  Construction and analysis of simian virus 40 origins defective in tumor antigen binding and DNA replication.

Authors:  R M Myers; R Tjian
Journal:  Proc Natl Acad Sci U S A       Date:  1980-11       Impact factor: 11.205

8.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

9.  Simian virus 40 early mRNA's contain multiple 5' termini upstream and downstream from a Hogness-Goldberg sequence; a shift in 5' termini during the lytic cycle is mediated by large T antigen.

Authors:  P K Ghosh; P Lebowitz
Journal:  J Virol       Date:  1981-10       Impact factor: 5.103

10.  DNA sequences preceding the rabbit beta-globin gene are required for formation in mouse L cells of beta-globin RNA with the correct 5' terminus.

Authors:  P Dierks; A van Ooyen; N Mantei; C Weissmann
Journal:  Proc Natl Acad Sci U S A       Date:  1981-03       Impact factor: 11.205

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  106 in total

1.  Sp1 mediates cell proliferation-dependent regulation of rat DNA topoisomerase IIalpha gene promoter.

Authors:  J H Yoon; J K Kim; G B Rha; M Oh; S H Park; R H Seong; S H Hong; S D Park
Journal:  Biochem J       Date:  1999-12-01       Impact factor: 3.857

2.  DNA replication efficiency depends on transcription factor-binding sites.

Authors:  W J Turner; M E Woodworth
Journal:  J Virol       Date:  2001-06       Impact factor: 5.103

3.  A novel, plasmid-based system for studying gene rearrangements in mammalian cells.

Authors:  R S Krauss; I B Weinstein
Journal:  Mol Cell Biol       Date:  1991-08       Impact factor: 4.272

4.  WORDUP: an efficient algorithm for discovering statistically significant patterns in DNA sequences.

Authors:  G Pesole; N Prunella; S Liuni; M Attimonelli; C Saccone
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

5.  Opposite-strand RNAs from the 5' flanking region of the mouse dihydrofolate reductase gene.

Authors:  P J Farnham; J M Abrams; R T Schimke
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

6.  Replication origins and a sequence involved in coordinate induction of the immediate-early gene family are conserved in an intergenic region of herpes simplex virus.

Authors:  J L Whitton; J B Clements
Journal:  Nucleic Acids Res       Date:  1984-02-24       Impact factor: 16.971

7.  Far upstream sequences are required for efficient transcription from the adenovirus-2 E1A transcription unit.

Authors:  P Sassone-Corsi; R Hen; E Borrelli; T Leff; P Chambon
Journal:  Nucleic Acids Res       Date:  1983-12-20       Impact factor: 16.971

8.  Transcription of a cloned Xenopus laevis H4 histone gene in the homologous frog oocyte system depends on an evolutionary conserved sequence motif in the -50 region.

Authors:  R G Clerc; P Bucher; K Strub; M L Birnstiel
Journal:  Nucleic Acids Res       Date:  1983-12-20       Impact factor: 16.971

9.  Mapping of the late promoter of simian virus 40.

Authors:  S W Hartzell; B J Byrne; K N Subramanian
Journal:  Proc Natl Acad Sci U S A       Date:  1984-01       Impact factor: 11.205

10.  Expression of the chloramphenicol acetyltransferase gene in mammalian cells under the control of adenovirus type 12 promoters: effect of promoter methylation on gene expression.

Authors:  I Kruczek; W Doerfler
Journal:  Proc Natl Acad Sci U S A       Date:  1983-12       Impact factor: 11.205

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