Literature DB >> 6287419

Enzymatic replacement in vitro of the first anticodon base of yeast tRNAAsp: application to the study of tRNA maturation in vivo, after microinjection into frog oocytes.

P Carbon, E Haumont, S De Henau, G Keith, H Grosjean.   

Abstract

A combination of several enzymes, RNase-T1, nuclease S1, T4-polynucleotide kinase and T4-RNA ligase were used to prepare and modify different fragments of yeast tRNAAsp (normal anticodon G U C). This allowed us to reconstitute, in vitro, a chimeric tRNA that has any of the four bases G, A, U or C, as the first anticodon nucleotide, labelled with (32p) in its 3' position. Such reconstituted (32p) labelled yeast tRNAAsp were microinjected into the cytoplasm or the nucleus of the frog oocyte and checked for their stability as well as for their potential to work as a substrate for the maturation (modifying) enzymes under in vivo conditions. Our results indicate that the chimeric yeast tRNAsAsp were quite stable inside the frog oocyte. Also, the G34 was effectively transformed inside the cytoplasm of frog oocyte into Q34 and mannosyl-Q34; U34 into mcm5s2U and mcm5U. In contrast, C34 and A34 were not transformed at all neither in the cytoplasm nor in the nucleus of the frog oocyte. The above procedure constitutes a new approach in order to detect the presence of a given modifying enzyme inside the frog oocyte; also it provides informations about its cellular location and possibility about its specificity of interaction with foreign tRNA.

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Year:  1982        PMID: 6287419      PMCID: PMC320746          DOI: 10.1093/nar/10.12.3715

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  40 in total

1.  Isolation and characterization of a guanine insertion enzyme, a specific tRNA transglycosylase, from Escherichia coli.

Authors:  N Okada; S Nishimura
Journal:  J Biol Chem       Date:  1979-04-25       Impact factor: 5.157

2.  Intracellular transport of microinjected 5S and small nuclear RNAs.

Authors:  E M De Robertis; S Lienhard; R F Parisot
Journal:  Nature       Date:  1982-02-18       Impact factor: 49.962

3.  TRNA precursor transcribed from a mutant human gene inserted into a SV40 vector is processed incorrectly.

Authors:  M Zasloff; T Santos; D H Hamer
Journal:  Nature       Date:  1982-02-11       Impact factor: 49.962

4.  Mutations of the yeast SUP4 tRNATyr locus: transcription of the mutant genes in vitro.

Authors:  R A Koski; S G Clarkson; J Kurjan; B D Hall; M Smith
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

5.  Internal control regions for transcription of eukaryotic tRNA genes.

Authors:  S Sharp; D DeFranco; T Dingermann; P Farrell; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

6.  Two conserved sequence blocks within eukaryotic tRNA genes are major promoter elements.

Authors:  G Galli; H Hofstetter; M L Birnstiel
Journal:  Nature       Date:  1981-12-17       Impact factor: 49.962

7.  Reactions at the termini of tRNA with T4 RNA ligase.

Authors:  A G Bruce; O C Uhlenbeck
Journal:  Nucleic Acids Res       Date:  1978-10       Impact factor: 16.971

8.  Site-specific mutagenesis on cloned DNAs: generation of a mutant of Escherichia coli tyrosine suppressor tRNA in which the sequence G-T-T-C corresponding to the universal G-T-pseudouracil-C sequence of tRNAs is changed to G-A-T-C.

Authors:  I Kudo; M Leineweber; U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  1981-08       Impact factor: 11.205

9.  Initiator tRNAs have a unique anticodon loop conformation.

Authors:  P Wrede; N H Woo; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1979-07       Impact factor: 11.205

10.  Total synthesis of a RNA molecule with sequence identical to that of Escherichia coli formylmethionine tRNA.

Authors:  E Ohtsuka; S Tanaka; T Tanaka; T Miyake; A F Markham; E Nakagawa; T Wakabayashi; Y Taniyama; S Nishikawa; R Fukumoto; H Uemura; T Doi; T Tokunaga; M Ikehara
Journal:  Proc Natl Acad Sci U S A       Date:  1981-09       Impact factor: 11.205

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  12 in total

1.  DNA sequence and transcript mapping of MOD5: features of the 5' region which suggest two translational starts.

Authors:  D Najarian; M E Dihanich; N C Martin; A K Hopper
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

Review 2.  Biosynthesis of pyrrolopyrimidines.

Authors:  Reid M McCarty; Vahe Bandarian
Journal:  Bioorg Chem       Date:  2012-01-31       Impact factor: 5.275

3.  In vitro construction of yeast tRNAAsp variants: nucleotide substitutions and additions in T-stem and T-loop.

Authors:  P Carbon; J P Ebel
Journal:  Nucleic Acids Res       Date:  1987-03-11       Impact factor: 16.971

4.  Replacement and insertion of nucleotides at the anticodon loop of E. coli tRNAMetf by ligation of chemically synthesized ribooligonucleotides.

Authors:  T Doi; A Yamane; J Matsugi; E Ohtsuka; M Ikehara
Journal:  Nucleic Acids Res       Date:  1985-05-24       Impact factor: 16.971

5.  Retrograde nuclear transport from the cytoplasm is required for tRNATyr maturation in T. brucei.

Authors:  Alan C Kessler; Sneha S Kulkarni; Mellie J Paulines; Mary Anne T Rubio; Patrick A Limbach; Zdeněk Paris; Juan D Alfonzo
Journal:  RNA Biol       Date:  2017-11-03       Impact factor: 4.652

6.  Base substitutions in the wobble position of the anticodon inhibit aminoacylation of E. coli tRNAfMet by E. coli Met-tRNA synthetase.

Authors:  L H Schulman; H Pelka; M Susani
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

7.  Post-transcriptional modification of the wobble nucleotide in anticodon-substituted yeast tRNAArgII after microinjection into Xenopus laevis oocytes.

Authors:  M Fournier; E Haumont; S de Henau; J Gangloff; H Grosjean
Journal:  Nucleic Acids Res       Date:  1983-02-11       Impact factor: 16.971

8.  Queuosine formation in eukaryotic tRNA occurs via a mitochondria-localized heteromeric transglycosylase.

Authors:  Coilin Boland; Patti Hayes; Ismael Santa-Maria; Susumu Nishimura; Vincent P Kelly
Journal:  J Biol Chem       Date:  2009-05-04       Impact factor: 5.157

9.  Site-directed in vitro replacement of nucleosides in the anticodon loop of tRNA: application to the study of structural requirements for queuine insertase activity.

Authors:  P Carbon; E Haumont; M Fournier; S de Henau; H Grosjean
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

10.  Enzymatic 2'-O-methylation of the wobble nucleoside of eukaryotic tRNAPhe: specificity depends on structural elements outside the anticodon loop.

Authors:  L Droogmans; E Haumont; S de Henau; H Grosjean
Journal:  EMBO J       Date:  1986-05       Impact factor: 11.598

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