Literature DB >> 19414587

Queuosine formation in eukaryotic tRNA occurs via a mitochondria-localized heteromeric transglycosylase.

Coilin Boland1, Patti Hayes, Ismael Santa-Maria, Susumu Nishimura, Vincent P Kelly.   

Abstract

tRNA guanine transglycosylase (TGT) enzymes are responsible for the formation of queuosine in the anticodon loop (position 34) of tRNA(Asp), tRNA(Asn), tRNA(His), and tRNA(Tyr); an almost universal event in eubacterial and eukaryotic species. Despite extensive characterization of the eubacterial TGT the eukaryotic activity has remained undefined. Our search of mouse EST and cDNA data bases identified a homologue of the Escherichia coli TGT and three spliced variants of the queuine tRNA guanine transglycosylase domain containing 1 (QTRTD1) gene. QTRTD1 variant_1 (Qv1) was found to be the predominant adult form. Functional cooperativity of TGT and Qv1 was suggested by their coordinate mRNA expression in Northern blots and from their association in vivo by immunoprecipitation. Neither TGT nor Qv1 alone could complement a tgt mutation in E. coli. However, transglycosylase activity could be obtained when the proteins were combined in vitro. Confocal and immunoblot analysis suggest that TGT weakly interacts with the outer mitochondrial membrane possibly through association with Qv1, which was found to be stably associated with the organelle.

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Year:  2009        PMID: 19414587      PMCID: PMC2709355          DOI: 10.1074/jbc.M109.002477

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  42 in total

1.  ASD: the Alternative Splicing Database.

Authors:  T A Thanaraj; Stefan Stamm; Francis Clark; Jean-Jack Riethoven; Vincent Le Texier; Juha Muilu
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  Analysis and prediction of leucine-rich nuclear export signals.

Authors:  Tanja la Cour; Lars Kiemer; Anne Mølgaard; Ramneek Gupta; Karen Skriver; Søren Brunak
Journal:  Protein Eng Des Sel       Date:  2004-08-16       Impact factor: 1.650

3.  An unexpected absence of queuosine modification in the tRNAs of an Escherichia coli B strain.

Authors:  T K Dineshkumar; Swapna Thanedar; C Subbulakshmi; Umesh Varshney
Journal:  Microbiology       Date:  2002-12       Impact factor: 2.777

4.  Structure of the modified nucleoside Q isolated from Escherichia coli transfer ribonucleic acid. 7-(4,5-cis-Dihydroxy-1-cyclopenten-3-ylaminomethyl)-7-deazaguanosine.

Authors:  H Kasai; Z Oashi; F Harada; S Nishimura; N J Oppenheimer; P F Crain; J G Liehr; D L von Minden; J A McCloskey
Journal:  Biochemistry       Date:  1975-09-23       Impact factor: 3.162

5.  Studies with a homogeneous enzyme from rabbit erythrocytes catalyzing the insertion of guanine into tRNA.

Authors:  N K Howes; W R Farkas
Journal:  J Biol Chem       Date:  1978-12-25       Impact factor: 5.157

6.  Characterization of cDNA encoding the human tRNA-guanine transglycosylase (TGT) catalytic subunit.

Authors:  K L Deshpande; J R Katze
Journal:  Gene       Date:  2001-03-07       Impact factor: 3.688

7.  Specific lack of the hypermodified nucleoside, queuosine, in hepatoma mitochondrial aspartate transfer RNA and its possible biological significance.

Authors:  E Randerath; H P Agrawal; K Randerath
Journal:  Cancer Res       Date:  1984-03       Impact factor: 12.701

8.  Chemical trapping and crystal structure of a catalytic tRNA guanine transglycosylase covalent intermediate.

Authors:  Wei Xie; Xianjun Liu; Raven H Huang
Journal:  Nat Struct Biol       Date:  2003-08-31

Review 9.  Biosynthesis of the 7-deazaguanosine hypermodified nucleosides of transfer RNA.

Authors:  Dirk Iwata-Reuyl
Journal:  Bioorg Chem       Date:  2003-02       Impact factor: 5.275

10.  Crystal structure of archaeosine tRNA-guanine transglycosylase.

Authors:  Ryuichiro Ishitani; Osamu Nureki; Shuya Fukai; Teiya Kijimoto; Nobukazu Nameki; Masakatsu Watanabe; Hisao Kondo; Mitsuo Sekine; Norihiro Okada; Susumu Nishimura; Shigeyuki Yokoyama
Journal:  J Mol Biol       Date:  2002-05-03       Impact factor: 5.469

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  36 in total

Review 1.  Biosynthesis of pyrrolopyrimidines.

Authors:  Reid M McCarty; Vahe Bandarian
Journal:  Bioorg Chem       Date:  2012-01-31       Impact factor: 5.275

2.  Queuosine deficiency in eukaryotes compromises tyrosine production through increased tetrahydrobiopterin oxidation.

Authors:  Tatsiana Rakovich; Coilin Boland; Ilana Bernstein; Vimbai M Chikwana; Dirk Iwata-Reuyl; Vincent P Kelly
Journal:  J Biol Chem       Date:  2011-04-12       Impact factor: 5.157

3.  Characterization of the human tRNA-guanine transglycosylase: confirmation of the heterodimeric subunit structure.

Authors:  Yi-Chen Chen; Vincent P Kelly; Stefanie V Stachura; George A Garcia
Journal:  RNA       Date:  2010-03-30       Impact factor: 4.942

Review 4.  The role of intracellular compartmentalization on tRNA processing and modification.

Authors:  Alan C Kessler; Gabriel Silveira d'Almeida; Juan D Alfonzo
Journal:  RNA Biol       Date:  2017-09-26       Impact factor: 4.652

Review 5.  Posttranscriptional RNA Modifications: playing metabolic games in a cell's chemical Legoland.

Authors:  Mark Helm; Juan D Alfonzo
Journal:  Chem Biol       Date:  2013-12-05

Review 6.  Prolonging healthy aging: Longevity vitamins and proteins.

Authors:  Bruce N Ames
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-15       Impact factor: 11.205

7.  Retrograde nuclear transport from the cytoplasm is required for tRNATyr maturation in T. brucei.

Authors:  Alan C Kessler; Sneha S Kulkarni; Mellie J Paulines; Mary Anne T Rubio; Patrick A Limbach; Zdeněk Paris; Juan D Alfonzo
Journal:  RNA Biol       Date:  2017-11-03       Impact factor: 4.652

8.  Archaeosine Modification of Archaeal tRNA: Role in Structural Stabilization.

Authors:  Ben Turner; Brett W Burkhart; Katrin Weidenbach; Robert Ross; Patrick A Limbach; Ruth A Schmitz; Valérie de Crécy-Lagard; Kenneth M Stedman; Thomas J Santangelo; Dirk Iwata-Reuyl
Journal:  J Bacteriol       Date:  2020-03-26       Impact factor: 3.490

Review 9.  tRNA dynamics between the nucleus, cytoplasm and mitochondrial surface: Location, location, location.

Authors:  Kunal Chatterjee; Regina T Nostramo; Yao Wan; Anita K Hopper
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2017-11-28       Impact factor: 4.490

Review 10.  Transfer RNA modifications: nature's combinatorial chemistry playground.

Authors:  Jane E Jackman; Juan D Alfonzo
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-11-08       Impact factor: 9.957

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