Literature DB >> 19126702

Synergy of two reference genomes for the grass family.

Joachim Messing1.   

Abstract

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Year:  2009        PMID： 19126702      PMCID： PMC2613724          DOI： 10.1104/pp.108.128520

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  64 in total

1.  Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize.

Authors:  Michele Morgante; Stephan Brunner; Giorgio Pea; Kevin Fengler; Andrea Zuccolo; Antoni Rafalski
Journal:  Nat Genet       Date:  2005-07-31       Impact factor: 38.330

2.  Quality scores and SNP detection in sequencing-by-synthesis systems.

Authors:  William Brockman; Pablo Alvarez; Sarah Young; Manuel Garber; Georgia Giannoukos; William L Lee; Carsten Russ; Eric S Lander; Chad Nusbaum; David B Jaffe
Journal:  Genome Res       Date:  2008-01-22       Impact factor: 9.043

3.  The paleontology of intergene retrotransposons of maize.

Authors:  P SanMiguel; B S Gaut; A Tikhonov; Y Nakajima; J L Bennetzen
Journal:  Nat Genet       Date:  1998-09       Impact factor: 38.330

4.  Structure and base sequence in the cohesive ends of bacteriophage lambda DNA.

Authors:  R Wu; A D Kaiser
Journal:  J Mol Biol       Date:  1968-08-14       Impact factor: 5.469

5.  Pack-MULE transposable elements mediate gene evolution in plants.

Authors:  Ning Jiang; Zhirong Bao; Xiaoyu Zhang; Sean R Eddy; Susan R Wessler
Journal:  Nature       Date:  2004-09-30       Impact factor: 49.962

6.  Macrotransposition and other complex chromosomal restructuring in maize by closely linked transposons in direct orientation.

Authors:  Jun T Huang; Hugo K Dooner
Journal:  Plant Cell       Date:  2008-08-15       Impact factor: 11.277

7.  Gene loss and movement in the maize genome.

Authors:  Jinsheng Lai; Jianxin Ma; Zuzana Swigonová; Wusirika Ramakrishna; Eric Linton; Victor Llaca; Bahattin Tanyolac; Yong-Jin Park; O-Young Jeong; Jeffrey L Bennetzen; Joachim Messing
Journal:  Genome Res       Date:  2004-10       Impact factor: 9.043

8.  A physical map of the mouse genome.

Authors:  Simon G Gregory; Mandeep Sekhon; Jacqueline Schein; Shaying Zhao; Kazutoyo Osoegawa; Carol E Scott; Richard S Evans; Paul W Burridge; Tony V Cox; Christopher A Fox; Richard D Hutton; Ian R Mullenger; Kimbly J Phillips; James Smith; Jim Stalker; Glen J Threadgold; Ewan Birney; Kristine Wylie; Asif Chinwalla; John Wallis; LaDeana Hillier; Jason Carter; Tony Gaige; Sara Jaeger; Colin Kremitzki; Dan Layman; Jason Maas; Rebecca McGrane; Kelly Mead; Rebecca Walker; Steven Jones; Michael Smith; Jennifer Asano; Ian Bosdet; Susanna Chan; Suganthi Chittaranjan; Readman Chiu; Chris Fjell; Dan Fuhrmann; Noreen Girn; Catharine Gray; Ran Guin; Letticia Hsiao; Martin Krzywinski; Reta Kutsche; Soo Sen Lee; Carrie Mathewson; Candice McLeavy; Steve Messervier; Steven Ness; Pawan Pandoh; Anna-Liisa Prabhu; Parvaneh Saeedi; Duane Smailus; Lorraine Spence; Jeff Stott; Sheryl Taylor; Wesley Terpstra; Miranda Tsai; Jill Vardy; Natasja Wye; George Yang; Sofiya Shatsman; Bola Ayodeji; Keita Geer; Getahun Tsegaye; Alla Shvartsbeyn; Elizabeth Gebregeorgis; Margaret Krol; Daniel Russell; Larry Overton; Joel A Malek; Mike Holmes; Michael Heaney; Jyoti Shetty; Tamara Feldblyum; William C Nierman; Joseph J Catanese; Tim Hubbard; Robert H Waterston; Jane Rogers; Pieter J de Jong; Claire M Fraser; Marco Marra; John D McPherson; David R Bentley
Journal:  Nature       Date:  2002-08-04       Impact factor: 49.962

9.  The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.

Authors: 
Journal:  BMC Biol       Date:  2005-09-27       Impact factor: 7.431

10.  Substantial biases in ultra-short read data sets from high-throughput DNA sequencing.

Authors:  Juliane C Dohm; Claudio Lottaz; Tatiana Borodina; Heinz Himmelbauer
Journal:  Nucleic Acids Res       Date:  2008-07-26       Impact factor: 16.971
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  4 in total

1.  Structural and functional divergence of a 1-Mb duplicated region in the soybean (Glycine max) genome and comparison to an orthologous region from Phaseolus vulgaris.

Authors:  Jer-Young Lin; Robert M Stupar; Christian Hans; David L Hyten; Scott A Jackson
Journal:  Plant Cell       Date:  2010-08-20       Impact factor: 11.277

2.  Splendor in the grasses.

Authors:  Elizabeth A Kellogg; C Robin Buell
Journal:  Plant Physiol       Date:  2009-01       Impact factor: 8.340

3.  Amplification of prolamin storage protein genes in different subfamilies of the Poaceae.

Authors:  Jian-Hong Xu; Joachim Messing
Journal:  Theor Appl Genet       Date:  2009-08-29       Impact factor: 5.699

4.  Genome-wide characterization of the biggest grass, bamboo, based on 10,608 putative full-length cDNA sequences.

Authors:  Zhenhua Peng; Tingting Lu; Lubin Li; Xiaohui Liu; Zhimin Gao; Tao Hu; Xuewen Yang; Qi Feng; Jianping Guan; Qijun Weng; Danlin Fan; Chuanrang Zhu; Ying Lu; Bin Han; Zehui Jiang
Journal:  BMC Plant Biol       Date:  2010-06-18       Impact factor: 4.215
  4 in total

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