Literature DB >> 6273813

A member of a new repeated sequence family which is conserved throughout eucaryotic evolution is found between the human delta and beta globin genes.

R Miesfeld, M Krystal, N Arnheim.   

Abstract

A new class of human interspersed repeated sequences distinct from the AluI family was found by screening a human gene library with a mouse ribosomal gene non-transcribed spacer probe (rDNA NTS). A member of this sequence family was localized to a 251 bp segment between the human delta and beta globin genes: a region previously judged to be devoid of repeated DNA. The complete nucleotide sequence of this segment revealed a tandem block of 17 TG dinucleotides, a feature hypothesized by others to be a recombination hot spot responsible for gene conversion in the gamma globin locus region. When the genomes of Xenopus, pigeon, slime mold and yeast were examined, reiterated sequences homologous to both the mouse rDNA NTS and human globin repeat were found in every case. The discovery of this extraordinarily conserved repeated sequence family appears to have depended upon not using salmon sperm DNA during hybridization. The use of eucaryotic carrier DNA may bias the search for repeated sequences against any which may be highly conserved during eucaryotic evolution.

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Year:  1981        PMID: 6273813      PMCID: PMC327575          DOI: 10.1093/nar/9.22.5931

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  38 in total

1.  Isolation of yeast DNA.

Authors:  D R Cryer; R Eccleshall; J Marmur
Journal:  Methods Cell Biol       Date:  1975       Impact factor: 1.441

2.  SPECIFIC DUPLEX FORMATION IN VITRO OF MAMMALIAN DNA.

Authors:  P M WALKER; A MCLAREN
Journal:  J Mol Biol       Date:  1965-06       Impact factor: 5.469

3.  Screening lambdagt recombinant clones by hybridization to single plaques in situ.

Authors:  W D Benton; R W Davis
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

4.  Retention of common nucleotide sequences in the ribosomal deoxyribonucleic acid of eukaryotes and some of their physical characteristics.

Authors:  J H Sinclair; D D Brown
Journal:  Biochemistry       Date:  1971-07-06       Impact factor: 3.162

5.  Homology relationship between the messenger RNA and heterogeneous nuclear RNA of mouse L cells. A DNA excess hybridization study.

Authors:  B D Hames; R P Perry
Journal:  J Mol Biol       Date:  1977-01-25       Impact factor: 5.469

6.  Transcriptional analysis of interspersed repetitive polymerase III transcription units in human DNA.

Authors:  J T Elder; J Pan; C H Duncan; S M Weissman
Journal:  Nucleic Acids Res       Date:  1981-03-11       Impact factor: 16.971

7.  A membrane-filter technique for the detection of complementary DNA.

Authors:  D T Denhardt
Journal:  Biochem Biophys Res Commun       Date:  1966-06-13       Impact factor: 3.575

8.  Restriction endonuclease analysis of ribosomal DNA from Saccharomyces cerevisiae.

Authors:  J H Cramer; F W Farrelly; R H Rownd
Journal:  Mol Gen Genet       Date:  1976-11-17

9.  Isolation and characterization of cloned DNA: the delta and beta globin genes in homozygous beta + thalassemia.

Authors:  A L Burns; S Spence; K Kosche; F Ramirez; J G Mears; H Schreiner; C Miller; M Baird; D Leibowitz; P Giardina; A Markenson; A Bank
Journal:  Blood       Date:  1981-01       Impact factor: 22.113

10.  Identification of a second cryptic lambdoid prophage locus in the E. coli K12 chromosome.

Authors:  A Anilionis; P Ostapchuk; M Riley
Journal:  Mol Gen Genet       Date:  1980
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  92 in total

1.  Taq DNA polymerase slippage mutation rates measured by PCR and quasi-likelihood analysis: (CA/GT)n and (A/T)n microsatellites.

Authors:  Deepali Shinde; Yinglei Lai; Fengzhu Sun; Norman Arnheim
Journal:  Nucleic Acids Res       Date:  2003-02-01       Impact factor: 16.971

2.  Determination of the origin of nondisjunction in a 49,XXXXY male using hypervariable dinucleotide repeat sequences.

Authors:  T H Huang; F Greenberg; D H Ledbetter
Journal:  Hum Genet       Date:  1991-04       Impact factor: 4.132

3.  Poly[d(C-A)].poly[d(G-T)] is highly transcribed in the testes of Drosophila hydei.

Authors:  P Huijser; L Beckers; B Top; M Hermans; R Sinke; W Hennig
Journal:  Chromosoma       Date:  1990-12       Impact factor: 4.316

4.  The promoter of the CD11b gene directs myeloid-specific and developmentally regulated expression.

Authors:  C S Shelley; M A Arnaout
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-01       Impact factor: 11.205

5.  Mouse Oct-3 maps between the tcl12 embryonic lethal gene and the Qa gene in the H-2 complex.

Authors:  H Uehara
Journal:  Immunogenetics       Date:  1991       Impact factor: 2.846

6.  Locations and contexts of sequences that hybridize to poly(dG-dT).(dC-dA) in mammalian ribosomal DNAs and two X-linked genes.

Authors:  D C Braaten; J R Thomas; R D Little; K R Dickson; I Goldberg; D Schlessinger; A Ciccodicola; M D'Urso
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

7.  Construction of a cytogenetically anchored microsatellite map in rabbit.

Authors:  Céline Chantry-Darmon; Céline Urien; Hélène Hayes; Maud Bertaud; Sead Chadi-Taourit; Patrick Chardon; Daniel Vaiman; Claire Rogel-Gaillard
Journal:  Mamm Genome       Date:  2005-06       Impact factor: 2.957

8.  Three organizations of human DNA.

Authors:  D Strayer; N Heintz; R Roeder; D Gillespie
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

9.  The organization of two related subfamilies of a human tandemly repeated DNA is chromosome specific.

Authors:  M Jeanpierre; D Weil; P Gallano; N Creau-Goldberg; C Junien
Journal:  Hum Genet       Date:  1985       Impact factor: 4.132

10.  Simple sequences are ubiquitous repetitive components of eukaryotic genomes.

Authors:  D Tautz; M Renz
Journal:  Nucleic Acids Res       Date:  1984-05-25       Impact factor: 16.971

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