Literature DB >> 6261252

No apparent nucleotide sequence specificity in cellular DNA juxtaposed to retrovirus proviruses.

K Shimotohno, H M Temin.   

Abstract

The sequences of the virus-cell junctions of seven DNA clones of spleen necrosis virus provirus were analyzed to determine the nucleotide sequence specificity of the cellular integration sites. As previously reported for one provirus, all clones contain a 5-base-pair direct repeat of cellular DNA at the cell-virus junctions and a 3-base-pair inverted repeat at both ends of the provirus DNA. The sequences of the 5-base-pair direct repeats are different in each clone and have no apparent homology to viral DNA. No apparent common features and no sequences significantly homologous to the ends of the provirus DNA were found in the cellular DNAs surrounding the viral integration sites.

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Year:  1980        PMID： 6261252      PMCID： PMC350502          DOI： 10.1073/pnas.77.12.7357

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  28 in total

1.  The arrangement of simian virus 40 sequences in the DNA of transformed cells.

Authors:  M Botchan; W Topp; J Sambrook
Journal:  Cell       Date:  1976-10       Impact factor: 41.582

2.  Sites of integration of infectious DNA of avian reticuloendotheliosis viruses in different avian cellular DNAs.

Authors:  N Battula; H M Temin
Journal:  Cell       Date:  1978-02       Impact factor: 41.582

3.  Mapping unintegrated avian sarcoma virus DNA: termini of linear DNA bear 300 nucleotides present once or twice in two species of circular DNA.

Authors:  P R Shank; S H Hughes; H J Kung; J E Majors; N Quintrell; R V Guntaka; J M Bishop; H E Varmus
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

4.  Proviruses of avian sarcoma virus are terminally redundant, co-extensive with unintegrated linear DNA and integrated at many sites.

Authors:  S H Hughes; P R Shank; D H Spector; H J Kung; J M Bishop; H E Varmus; P K Vogt; M L Breitman
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

5.  DNA of noninfectious and infectious integrated spleen necrosis virus (SNV) is colinear with unintegrated SNV DNA and not grossly abnormal.

Authors:  E Keshet; J J O'Rear; H M Temin
Journal:  Cell       Date:  1979-01       Impact factor: 41.582

6.  Viral integration and excision: structure of the lambda att sites.

Authors:  A Landy; W Ross
Journal:  Science       Date:  1977-09-16       Impact factor: 47.728

7.  Screening lambdagt recombinant clones by hybridization to single plaques in situ.

Authors:  W D Benton; R W Davis
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

8.  A method for the recovery of DNA from agarose gels.

Authors:  H F Tabak; R A Flavell
Journal:  Nucleic Acids Res       Date:  1978-07       Impact factor: 16.971

9.  The integrated genome of murine leukemia virus.

Authors:  D Steffen; R A Weinberg
Journal:  Cell       Date:  1978-11       Impact factor: 41.582

10.  Infectious DNA of spleen necrosis virus is integrated at a single site in the DNA of chronically infected chicken fibroblasts.

Authors:  N Battula; H M Temin
Journal:  Proc Natl Acad Sci U S A       Date:  1977-01       Impact factor: 11.205
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  31 in total

1.  Host sequences flanking the HIV provirus.

Authors:  K A Vincent; D York-Higgins; M Quiroga; P O Brown
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

2.  Expression of V-SRC and chromosome analysis of a newly established cell line from rat sarcoma induced by an avian retroviral strain.

Authors:  M T Polianova; P K Jordanova
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

3.  Unusual features of integrated cDNAs generated by infection with genome-free retroviruses.

Authors:  K L Levine; B Steiner; K Johnson; R Aronoff; T J Quinton; M L Linial
Journal:  Mol Cell Biol       Date:  1990-05       Impact factor: 4.272

4.  Significance of DNase I-hypersensitive sites in the long terminal repeats of a Moloney murine leukemia virus vector.

Authors:  J A Rasmussen; E Gilboa
Journal:  J Virol       Date:  1987-05       Impact factor: 5.103

5.  The retrovirus pol gene encodes a product required for DNA integration: identification of a retrovirus int locus.

Authors:  A T Panganiban; H M Temin
Journal:  Proc Natl Acad Sci U S A       Date:  1984-12       Impact factor: 11.205

Review 6.  Retroviral-mediated gene transfer. Applications in neurobiology.

Authors:  M M Lo; M K Conrad; C Mamalaki; M J Kadan
Journal:  Mol Neurobiol       Date:  1988       Impact factor: 5.590

7.  Key determinants of target DNA recognition by retroviral intasomes.

Authors:  Erik Serrao; Allison Ballandras-Colas; Peter Cherepanov; Goedele N Maertens; Alan N Engelman
Journal:  Retrovirology       Date:  2015-04-30       Impact factor: 4.602

8.  A ubiquitin-conjugating enzyme, RAD6, affects the distribution of Ty1 retrotransposon integration positions.

Authors:  S W Liebman; G Newnam
Journal:  Genetics       Date:  1993-03       Impact factor: 4.562

9.  Integration of Rous sarcoma virus DNA into chicken embryo fibroblasts: no preferred proviral acceptor site in the DNA of clones of singly infected transformed chicken cells.

Authors:  T L Lerner; A M Skalka; H Hanafusa
Journal:  J Virol       Date:  1981-11       Impact factor: 5.103

10.  Fidelity of target site duplication and sequence preference during integration of xenotropic murine leukemia virus-related virus.

Authors:  Sanggu Kim; Alice Rusmevichientong; Beihua Dong; Roland Remenyi; Robert H Silverman; Samson A Chow
Journal:  PLoS One       Date:  2010-04-20       Impact factor: 3.240
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