Literature DB >> 6096823

Optimizing selection of restriction enzymes in the search for DNA variants.

E M Wijsman.   

Abstract

A model is developed for predicting the relative efficiencies of different enzymes for detecting DNA variants when such variants are the result of single base-pair changes. 71 enzymes are analyzed for this ability in human DNA. Their relative ranked efficiencies are influenced by the sizes of the probes used, and the size of the smallest detectable fragment produced.

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Year:  1984        PMID： 6096823      PMCID： PMC320450          DOI： 10.1093/nar/12.23.9209

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  35 in total

1.  Enzymatic synthesis of deoxyribonucleic acid. XI. Further studies on nearest neighbor base sequences in deoxyribonucleic acids.

Authors:  M N SWARTZ; T A TRAUTNER; A KORNBERG
Journal:  J Biol Chem       Date:  1962-06       Impact factor: 5.157

2.  Doublet frequency analysis of fractionated vertebrate nuclear DNA.

Authors:  G J Russell; P M Walker; R A Elton; J H Subak-Sharpe
Journal:  J Mol Biol       Date:  1976-11       Impact factor: 5.469

3.  An approach to evolutionary relationships of mammalian DNA viruses through analysis of the pattern of nearest neighbor base sequences.

Authors:  H Subak-Sharpe; R R Bürk; L V Crawford; J M Morrison; J Hay; H M Keir
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1966

4.  A new polymorphism in the human beta-globin gene useful in antenatal diagnosis.

Authors:  M C Driscoll; M Baird; A Bank; E A Rachmilewitz
Journal:  J Clin Invest       Date:  1981-10       Impact factor: 14.808

5.  Some rules in the ordering of nucleotides in the DNA.

Authors:  R Nussinov
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

6.  The 3' untranslated regions of the duplicated human alpha-globin genes are unexpectedly divergent.

Authors:  A M Michelson; S H Orkin
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

7.  Polymorphism of DNA sequence adjacent to human beta-globin structural gene: relationship to sickle mutation.

Authors:  Y W Kan; A M Dozy
Journal:  Proc Natl Acad Sci U S A       Date:  1978-11       Impact factor: 11.205

8.  DNA methylation and the frequency of CpG in animal DNA.

Authors:  A P Bird
Journal:  Nucleic Acids Res       Date:  1980-04-11       Impact factor: 16.971

9.  The insulin gene is located on the short arm of chromosome 11 in humans.

Authors:  D Owerbach; G I Bell; W J Rutter; J A Brown; T B Shows
Journal:  Diabetes       Date:  1981-03       Impact factor: 9.461

10.  DNA sequence variants in the G gamma-, A gamma-, delta- and beta-globin genes of man.

Authors:  A J Jeffreys
Journal:  Cell       Date:  1979-09       Impact factor: 41.582
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  11 in total

1.  Immunoglobulin variable-region-like domains of diverse sequence within the major histocompatibility complex of the chicken.

Authors:  M M Miller; R Goto; S Young; J Chirivella; D Hawke; C G Miyada
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-15       Impact factor: 11.205

2.  A systematic approach for detecting high-frequency restriction fragment length polymorphisms using large genomic probes.

Authors:  J Feder; L Yen; E Wijsman; L Wang; L Wilkins; J Schroder; N Spurr; H Cann; M Blumenberg; L L Cavalli-Sforza
Journal:  Am J Hum Genet       Date:  1985-07       Impact factor: 11.025

3.  Linkage disequilibrium study of RFLPs detected at the human muscle nicotinic acetylcholine receptor subunit genes.

Authors:  E A Lobos; C H Rudnick; M S Watson; K E Isenberg
Journal:  Am J Hum Genet       Date:  1989-04       Impact factor: 11.025

4.  Genomic analysis I: inheritance units and genetic selection in the rapid discovery of locus linked DNA markers.

Authors:  A I Sanda; J P Ford
Journal:  Nucleic Acids Res       Date:  1986-09-25       Impact factor: 16.971

5.  The relative efficiency of restriction enzymes: an update.

Authors:  E J Devor
Journal:  Am J Hum Genet       Date:  1988-01       Impact factor: 11.025

6.  Identification of more than 500 RFLPs by screening random genomic clones.

Authors:  J W Schumm; R G Knowlton; J C Braman; D F Barker; D Botstein; G Akots; V A Brown; T C Gravius; C Helms; K Hsiao
Journal:  Am J Hum Genet       Date:  1988-01       Impact factor: 11.025

7.  The X chromosome shows less genetic variation at restriction sites than the autosomes.

Authors:  M H Hofker; M I Skraastad; A A Bergen; M C Wapenaar; E Bakker; A Millington-Ward; G J van Ommen; P L Pearson
Journal:  Am J Hum Genet       Date:  1986-10       Impact factor: 11.025

8.  Polymorphism and linkage of the alpha A-crystallin gene in t-haplotypes of the mouse.

Authors:  L C Skow; J N Nadeau; J C Ahn; H S Shin; K Artzt; D Bennett
Journal:  Genetics       Date:  1987-05       Impact factor: 4.562

9.  Molecular and genetic characterization and physical mapping of 11 new markers detecting multiallele restriction fragment length polymorphisms on the short arm of human chromosome 3.

Authors:  F Latif; W S Modi; F M Duh; L Schmidt; H Li; L Geil; M L Orcutt; A Heppell-Parton; P H Rabbitts; W M Linehan
Journal:  Hum Genet       Date:  1992 Sep-Oct       Impact factor: 4.132

10.  Alcohol dehydrogenase genes: restriction fragment length polymorphisms for ADH4 (pi-ADH) and ADH5 (chi-ADH) and construction of haplotypes among different ADH classes.

Authors:  K Edman; W Maret
Journal:  Hum Genet       Date:  1992-12       Impact factor: 4.132
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