Literature DB >> 6095201

Organization of the GAL1-GAL10 intergenic control region chromatin.

D Lohr.   

Abstract

A defined, "far upstream" promoter element, the Upstream Activator Sequence (UAS), which mediates the galactose dependent induction of expression of the GAL10 gene in yeast, is the locus of an anomalous, mainly expression independent chromatin structure. The UAS chromatin shows three symmetrical DNase I hypersensitive sites in brief digests, a loss of the 10 bp DNase I ladder pattern in more extensive digests and an enhanced staphylococcal nuclease sensitivity. This anomalous structure is confined to a small region of the UAS. The surrounding chromatin, including the TATA box regions shows a more typical, but expression dependent nucleoprotein, probably nucleosomal, organization. Such an arrangement may be a common feature of eukaryotic genes.

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Year:  1984        PMID: 6095201      PMCID: PMC320387          DOI: 10.1093/nar/12.22.8457

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  29 in total

1.  A stretch of "late" SV40 viral DNA about 400 bp long which includes the origin of replication is specifically exposed in SV40 minichromosomes.

Authors:  A J Varshavsky; O Sundin; M Bohn
Journal:  Cell       Date:  1979-02       Impact factor: 41.582

2.  Galactose regulation in Saccharomyces cerevisiae. The enzymes encoded by the GAL7, 10, 1 cluster are co-ordinately controlled and separately translated.

Authors:  J R Broach
Journal:  J Mol Biol       Date:  1979-06-15       Impact factor: 5.469

3.  Constitutive synthesis of the GAL4 protein, a galactose pathway regulator in Saccharomyces cerevisiae.

Authors:  D Perlman; J E Hopper
Journal:  Cell       Date:  1979-01       Impact factor: 41.582

4.  The interaction of RNA polymerase and lac repressor with the lac control region.

Authors:  A Schmitz; D J Galas
Journal:  Nucleic Acids Res       Date:  1979-01       Impact factor: 16.971

5.  The chromatin structure of specific genes: II. Disruption of chromatin structure during gene activity.

Authors:  C Wu; Y C Wong; S C Elgin
Journal:  Cell       Date:  1979-04       Impact factor: 41.582

Review 6.  DNases and their use in the studies of primary structure of nucleic acids.

Authors:  M Laskowski
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1967

7.  Non-random cleavage of SV40 DNA in the compact minichromosome and free in solution by micrococcal nuclease.

Authors:  S A Nedospasov; G P Georgiev
Journal:  Biochem Biophys Res Commun       Date:  1980-01-29       Impact factor: 3.575

8.  Interaction of super-repressible and dominant constitutive mutations for the synthesis of galactose pathway enzymes in Saccharomyces cerevisiae.

Authors:  Y Nogi; K Matsumoto; A Toh-e; Y Oshima
Journal:  Mol Gen Genet       Date:  1977-04-29

9.  Isolation of galactose-inducible DNA sequences from Saccharomyces cerevisiae by differential plaque filter hybridization.

Authors:  T P St John; R W Davis
Journal:  Cell       Date:  1979-02       Impact factor: 41.582

10.  Regulation of the galactose pathway in Saccharomyces cerevisiae: induction of uridyl transferase mRNA and dependency on GAL4 gene function.

Authors:  J E Hopper; J R Broach; L B Rowe
Journal:  Proc Natl Acad Sci U S A       Date:  1978-06       Impact factor: 11.205

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  38 in total

1.  GCN5 dependence of chromatin remodeling and transcriptional activation by the GAL4 and VP16 activation domains in budding yeast.

Authors:  G A Stafford; R H Morse
Journal:  Mol Cell Biol       Date:  2001-07       Impact factor: 4.272

2.  Upstream activation sequence-dependent alteration of chromatin structure and transcription activation of the yeast GAL1-GAL10 genes.

Authors:  M J Fedor; R D Kornberg
Journal:  Mol Cell Biol       Date:  1989-04       Impact factor: 4.272

3.  SWI/SNF is required for transcriptional memory at the yeast GAL gene cluster.

Authors:  Sharmistha Kundu; Peter J Horn; Craig L Peterson
Journal:  Genes Dev       Date:  2007-04-15       Impact factor: 11.361

4.  Control of chromatin structure by spt6: different consequences in coding and regulatory regions.

Authors:  Iva Ivanovska; Pierre-Étienne Jacques; Oliver J Rando; François Robert; Fred Winston
Journal:  Mol Cell Biol       Date:  2010-11-22       Impact factor: 4.272

5.  Transcription regulation by the noncoding RNA SRG1 requires Spt2-dependent chromatin deposition in the wake of RNA polymerase II.

Authors:  Philippe Thebault; Geneviève Boutin; Wajid Bhat; Anne Rufiange; Joseph Martens; Amine Nourani
Journal:  Mol Cell Biol       Date:  2011-01-10       Impact factor: 4.272

6.  The Paf1 complex represses SER3 transcription in Saccharomyces cerevisiae by facilitating intergenic transcription-dependent nucleosome occupancy of the SER3 promoter.

Authors:  Justin A Pruneski; Sarah J Hainer; Kostadin O Petrov; Joseph A Martens
Journal:  Eukaryot Cell       Date:  2011-08-26

7.  SWI-SNF complex participation in transcriptional activation at a step subsequent to activator binding.

Authors:  M P Ryan; R Jones; R H Morse
Journal:  Mol Cell Biol       Date:  1998-04       Impact factor: 4.272

8.  Functional relationship among TATA sequences, gene induction and transcription initiation in the beta-galactosidase, LAC4, gene from Kluyveromyces lactis.

Authors:  A G Ficca; C P Hollenberg
Journal:  Curr Genet       Date:  1989-04       Impact factor: 3.886

Review 9.  Role of chromatin states in transcriptional memory.

Authors:  Sharmistha Kundu; Craig L Peterson
Journal:  Biochim Biophys Acta       Date:  2009-02-21

10.  Structure of the transcriptionally repressed phosphate-repressible acid phosphatase gene (PHO5) of Saccharomyces cerevisiae.

Authors:  L W Bergman; M C Stranathan; L H Preis
Journal:  Mol Cell Biol       Date:  1986-01       Impact factor: 4.272

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