Literature DB >> 19236904

Role of chromatin states in transcriptional memory.

Sharmistha Kundu1, Craig L Peterson.   

Abstract

Establishment of cellular memory and its faithful propagation is critical for successful development of multicellular organisms. As pluripotent cells differentiate, choices in cell fate are inherited and maintained by their progeny throughout the lifetime of the organism. A major factor in this process is the epigenetic inheritance of specific transcriptional states or transcriptional memory. In this review, we discuss chromatin transitions and mechanisms by which they are inherited by subsequent generations. We also discuss illuminating cases of cellular memory in budding yeast and evaluate whether transcriptional memory in yeast is nuclear or cytoplasmically inherited.

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Year:  2009        PMID： 19236904      PMCID： PMC2692360          DOI： 10.1016/j.bbagen.2009.02.009

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN： 0006-3002


  293 in total

Review 1.  Polycomb repression: from cellular memory to cellular proliferation and cancer.

Authors:  Jacqueline J L Jacobs; Maarten van Lohuizen
Journal:  Biochim Biophys Acta       Date:  2002-06-21

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Journal:  Nat Genet       Date:  2002-04-22       Impact factor: 38.330

Review 3.  Division of labor in polycomb group repression.

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Review 6.  SET domain proteins modulate chromatin domains in eu- and heterochromatin.

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7.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

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8.  Trithorax and dCBP acting in a complex to maintain expression of a homeotic gene.

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Journal:  Science       Date:  2001-11-09       Impact factor: 47.728

9.  A role for histones H2A/H2B in chromatin folding and transcriptional repression.

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Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-15       Impact factor: 11.205

10.  Ten different Polycomb group genes are required for spatial control of the abdA and AbdB homeotic products.

Authors:  J Simon; A Chiang; W Bender
Journal:  Development       Date:  1992-02       Impact factor: 6.868
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  20 in total

Review 1.  Epigenetic memories: structural marks or active circuits?

Authors:  Floriane Nicol-Benoît; Pascale Le-Goff; Yves Le-Dréan; Florence Demay; Farzad Pakdel; Gilles Flouriot; Denis Michel
Journal:  Cell Mol Life Sci       Date:  2012-02-14       Impact factor: 9.261

Review 2.  Double-strand breaks and the concept of short- and long-term epigenetic memory.

Authors:  Christian Orlowski; Li-Jeen Mah; Raja S Vasireddy; Assam El-Osta; Tom C Karagiannis
Journal:  Chromosoma       Date:  2010-12-21       Impact factor: 4.316

3.  Chromatin accessibility at the HIV LTR promoter sets a threshold for NF-κB mediated viral gene expression.

Authors:  Kathryn Miller-Jensen; Siddharth S Dey; Nhung Pham; Jonathan E Foley; Adam P Arkin; David V Schaffer
Journal:  Integr Biol (Camb)       Date:  2012-05-03       Impact factor: 2.192

Review 4.  Folate and DNA methylation: a review of molecular mechanisms and the evidence for folate's role.

Authors:  Krista S Crider; Thomas P Yang; Robert J Berry; Lynn B Bailey
Journal:  Adv Nutr       Date:  2012-01-05       Impact factor: 8.701

5.  The role of components of the chromatin modification machinery in carcinogenesis of clear cell carcinoma of the ovary (Review).

Authors:  Hiroshi Shigetomi; Akira Oonogi; Taihei Tsunemi; Yasuhito Tanase; Yoshihiko Yamada; Hirotaka Kajihara; Yoriko Yoshizawa; Naoto Furukawa; Shoji Haruta; Shozo Yoshida; Toshiyuki Sado; Hidekazu Oi; Hiroshi Kobayashi
Journal:  Oncol Lett       Date:  2011-05-16       Impact factor: 2.967

6.  MLL2 is required in oocytes for bulk histone 3 lysine 4 trimethylation and transcriptional silencing.

Authors:  Claudia V Andreu-Vieyra; Ruihong Chen; Julio E Agno; Stefan Glaser; Konstantinos Anastassiadis; A Francis Stewart; Martin M Matzuk
Journal:  PLoS Biol       Date:  2010-08-17       Impact factor: 8.029

7.  SPR-5 and MET-2 function cooperatively to reestablish an epigenetic ground state during passage through the germ line.

Authors:  Shana C Kerr; Chelsey Chandler Ruppersburg; Joshua W Francis; David J Katz
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-16       Impact factor: 11.205

8.  DNA replication stress induces deregulation of the cell cycle events in root meristems of Allium cepa.

Authors:  Aneta Zabka; Justyna Teresa Polit; Janusz Maszewski
Journal:  Ann Bot       Date:  2012-10-18       Impact factor: 4.357

9.  Cellular memory of acquired stress resistance in Saccharomyces cerevisiae.

Authors:  Qiaoning Guan; Suraiya Haroon; Diego González Bravo; Jessica L Will; Audrey P Gasch
Journal:  Genetics       Date:  2012-07-30       Impact factor: 4.562

10.  The Schizosaccharomyces pombe JmjC-protein, Msc1, prevents H2A.Z localization in centromeric and subtelomeric chromatin domains.

Authors:  Luke Buchanan; Mickaël Durand-Dubief; Assen Roguev; Cagri Sakalar; Brian Wilhelm; Annelie Strålfors; Anna Shevchenko; Rein Aasland; Andrej Shevchenko; Karl Ekwall; A Francis Stewart
Journal:  PLoS Genet       Date:  2009-11-13       Impact factor: 5.917
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