Literature DB >> 6087277

Interruption of a human nuclear sequence homologous to mitochondrial DNA by a member of the KpnI 1.8 kb family.

H Nomiyama, T Tsuzuki, S Wakasugi, M Fukuda, K Shimada.   

Abstract

We reported that several DNA sequences homologous to mitochondrial DNA (mtDNA) are present in the human nuclear genome (Tsuzuki et al. (1983) Gene 25, 223-229). Detailed Southern blot analyses revealed that one of such sequences is interrupted by a repetitive sequence about 1.8 kb long, and that the insert is one member of the dispersed repeated DNA sequences of the KpnI 1.8 kb family. Nucleotide sequence analysis showed that the KpnI 1.8 kb DNA is flanked with imperfect 15-base pair (bp) direct repeats of mtDNA. This KpnI 1.8 kb DNA has an A-rich sequence at its 3'-end, and has a considerable homology with one of the published cDNA sequences homologous to one of the human KpnI families and also to one of the African green monkey KpnI families, KpnI-LS1. These structural features suggest that the KpnI 1.8 kb DNA is a movable element and is inserted within the mtDNA-like sequence by an RNA-mediated process.

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Year:  1984        PMID: 6087277      PMCID: PMC318915          DOI: 10.1093/nar/12.13.5225

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  A general method for isolation of high molecular weight DNA from eukaryotes.

Authors:  N Blin; D W Stafford
Journal:  Nucleic Acids Res       Date:  1976-09       Impact factor: 16.971

2.  The bidirectional transfer of DNA and RNA to nitrocellulose or diazobenzyloxymethyl-paper.

Authors:  G E Smith; M D Summers
Journal:  Anal Biochem       Date:  1980-11-15       Impact factor: 3.365

3.  Direct repeats flank three small nuclear RNA pseudogenes in the human genome.

Authors:  S W Van Arsdell; R A Denison; L B Bernstein; A M Weiner; T Manser; R F Gesteland
Journal:  Cell       Date:  1981-10       Impact factor: 41.582

Review 4.  Short interspersed repetitive DNA elements in eucaryotes: transposable DNA elements generated by reverse transcription of RNA pol III transcripts?

Authors:  P Jagadeeswaran; B G Forget; S M Weissman
Journal:  Cell       Date:  1981-10       Impact factor: 41.582

5.  Cloning of human mitochondrial DNA in Escherichia coli.

Authors:  J Drouin
Journal:  J Mol Biol       Date:  1980-06-15       Impact factor: 5.469

6.  Rearranged sequences of a human Kpn I element.

Authors:  S S Potter
Journal:  Proc Natl Acad Sci U S A       Date:  1984-02       Impact factor: 11.205

7.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

8.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

9.  The evolution of genes: the chicken preproinsulin gene.

Authors:  F Perler; A Efstratiadis; P Lomedico; W Gilbert; R Kolodner; J Dodgson
Journal:  Cell       Date:  1980-06       Impact factor: 41.582

10.  KpnI families of long, interspersed repetitive DNAs in human and other primate genomes.

Authors:  B Shafit-Zagardo; J J Maio; F L Brown
Journal:  Nucleic Acids Res       Date:  1982-05-25       Impact factor: 16.971

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  12 in total

1.  Molecular structures of mitochondrial-DNA-like sequences in human nuclear DNA.

Authors:  H Nomiyama; M Fukuda; S Wakasugi; T Tsuzuki; K Shimada
Journal:  Nucleic Acids Res       Date:  1985-03-11       Impact factor: 16.971

2.  Transposition of a long member of the L1 major interspersed DNA family into the mouse beta globin gene locus.

Authors:  F H Burton; D D Loeb; S F Chao; C A Hutchison; M H Edgell
Journal:  Nucleic Acids Res       Date:  1985-07-25       Impact factor: 16.971

3.  Sequence analysis of a KpnI family member near the 3' end of human beta-globin gene.

Authors:  M Hattori; S Hidaka; Y Sakaki
Journal:  Nucleic Acids Res       Date:  1985-11-11       Impact factor: 16.971

4.  Identification and characterization of new human medium reiteration frequency repeats.

Authors:  J Jurka; D J Kaplan; C H Duncan; J Walichiewicz; A Milosavljevic; G Murali; J F Solus
Journal:  Nucleic Acids Res       Date:  1993-03-11       Impact factor: 16.971

5.  Multi-copy nuclear pseudogenes of mitochondrial DNA reveal recent acute genetic changes in the human genome.

Authors:  G Hu; W G Thilly
Journal:  Curr Genet       Date:  1995-10       Impact factor: 3.886

6.  "Retroposon" insertion into the cellular oncogene c-myc in canine transmissible venereal tumor.

Authors:  N Katzir; G Rechavi; J B Cohen; T Unger; F Simoni; S Segal; D Cohen; D Givol
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

7.  Insertion of long interspersed repeated elements at the Igh (immunoglobulin heavy chain) and Mlvi-2 (Moloney leukemia virus integration 2) loci of rats.

Authors:  A Economou-Pachnis; M A Lohse; A V Furano; P N Tsichlis
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

8.  Ancient mtDNA sequences in the human nuclear genome: a potential source of errors in identifying pathogenic mutations.

Authors:  D C Wallace; C Stugard; D Murdock; T Schurr; M D Brown
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-23       Impact factor: 11.205

9.  Long interspersed repeated DNA (LINE) causes polymorphism at the rat insulin 1 locus.

Authors:  M S Lakshmikumaran; E D'Ambrosio; L A Laimins; D T Lin; A V Furano
Journal:  Mol Cell Biol       Date:  1985-09       Impact factor: 4.272

10.  Expression of a cytoplasmic LINE-1 transcript is regulated in a human teratocarcinoma cell line.

Authors:  J Skowronski; M F Singer
Journal:  Proc Natl Acad Sci U S A       Date:  1985-09       Impact factor: 11.205

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