Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Sequence analysis of a KpnI family member near the 3' end of human beta-globin gene.

Literature DB >> 2999705

Sequence analysis of a KpnI family member near the 3' end of human beta-globin gene.

Abstract

We determined the complete nucleotide sequence (6125 bp) of a full-length member of human KpnI family, designated T beta G41, which is located about 3 kb downstream from the beta-globin gene. Comparison of the sequence with the KpnI family sequence compiled by Singer revealed that a new 131 bp sequence is present in the T beta G41. Hybridization analyses showed that a few thousand of human KpnI family members are carrying this additional sequence. Computer search of DNA databases for T beta G41-homologous sequence showed that some T beta G41-homologous sequences were closely associated with pseudogenes. The T beta G41 sequence also showed significant sequence homology with ChBlym-1, a transferrin-like transforming gene of chicken. Furthermore, an amino acid sequence deduced from the T beta G41 nucleotide sequence revealed a relatively-high homology to those of human transferrin and lactotransferrin.

Entities: Chemical Gene Species

Mesh：

Substances：

Year: 1985 PMID： 2999705 PMCID： PMC322088 DOI： 10.1093/nar/13.21.7813

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

46 in total

1. Nucleotide sequence of a portion of human chromosome 9 containing a leukocyte interferon gene cluster.

Authors: A Ullrich; A Gray; D V Goeddel; T J Dull
Journal: J Mol Biol Date: 1982-04-15 Impact factor: 5.469

2. A family of long reiterated DNA sequences, one copy of which is next to the human beta globin gene.

Authors: J W Adams; R E Kaufman; P J Kretschmer; M Harrison; A W Nienhuis
Journal: Nucleic Acids Res Date: 1980-12-20 Impact factor: 16.971

3. Nucleotide sequence definition of a major human repeated DNA, the Hind III 1.9 kb family.

Authors: L Manuelidis
Journal: Nucleic Acids Res Date: 1982-05-25 Impact factor: 16.971

4. Structural analysis of the prolactin gene suggests a separate origin for its 5' end.

Authors: N E Cooke; J D Baxter
Journal: Nature Date: 1982-06-17 Impact factor: 49.962

5. SINEs and LINEs: highly repeated short and long interspersed sequences in mammalian genomes.

Authors: M F Singer
Journal: Cell Date: 1982-03 Impact factor: 41.582

6. Genomic representation of the Hind II 1.9 kb repeated DNA.

Authors: L Manuelidis; P A Biro
Journal: Nucleic Acids Res Date: 1982-05-25 Impact factor: 16.971

7. An 88 amino acid long C-terminal sequence of human lactotransferrin.

Authors: M H Metz-Boutigue; J Jollès; J Mazurier; G Spik; J Montreuil; P Jollès
Journal: FEBS Lett Date: 1982-06-01 Impact factor: 4.124

8. Human melanoma-associated antigen p97 is structurally and functionally related to transferrin.

Authors: J P Brown; R M Hewick; I Hellström; K E Hellström; R F Doolittle; W J Dreyer
Journal: Nature Date: 1982-03-11 Impact factor: 49.962

9. KpnI families of long, interspersed repetitive DNAs in human and other primate genomes.

Authors: B Shafit-Zagardo; J J Maio; F L Brown
Journal: Nucleic Acids Res Date: 1982-05-25 Impact factor: 16.971

10. Structure of a murine alpha interferon pseudogene with a repetitive R-type sequence in the 3' flanking region.

Authors: D Le Roscouet; G Vodjdani; Y Lemaigre-Dubreuil; M G Tovey; M Latta; J Doly
Journal: Mol Cell Biol Date: 1985-06 Impact factor: 4.272

56 in total

1. Antisense promoter of human L1 retrotransposon drives transcription of adjacent cellular genes.

Authors: M Speek
Journal: Mol Cell Biol Date: 2001-03 Impact factor: 4.272

2. Prototypic sequences for human repetitive DNA.

Authors: J Jurka; J Walichiewicz; A Milosavljevic
Journal: J Mol Evol Date: 1992-10 Impact factor: 2.395

3. Characterisation of a boundary between satellite III and alphoid sequences on human chromosome 10.

Authors: M S Jackson; S E Mole; B A Ponder
Journal: Nucleic Acids Res Date: 1992-09-25 Impact factor: 16.971

4. Convergent evolution of the red- and green-like visual pigment genes in fish, Astyanax fasciatus, and human.

Authors: R Yokoyama; S Yokoyama
Journal: Proc Natl Acad Sci U S A Date: 1990-12 Impact factor: 11.205

5. Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining.

Authors: Nora Zingler; Ute Willhoeft; Hans-Peter Brose; Volker Schoder; Thomas Jahns; Kay-Martin O Hanschmann; Tammy A Morrish; Johannes Löwer; Gerald G Schumann
Journal: Genome Res Date: 2005-06 Impact factor: 9.043

6. Large inversion in Escherichia coli K-12 1485IN between inversely oriented IS3 elements near lac and cdd.

Authors: Y Komoda; M Enomoto; A Tominaga
Journal: Genetics Date: 1991-11 Impact factor: 4.562

7. Identification, characterization, and cell specificity of a human LINE-1 promoter.

Authors: G D Swergold
Journal: Mol Cell Biol Date: 1990-12 Impact factor: 4.272

8. Characterization of the cloned BamHI restriction modification system: its nucleotide sequence, properties of the methylase, and expression in heterologous hosts.

Authors: J E Brooks; P D Nathan; D Landry; L A Sznyter; P Waite-Rees; C L Ives; L S Moran; B E Slatko; J S Benner
Journal: Nucleic Acids Res Date: 1991-02-25 Impact factor: 16.971

9. Cloning and structural analysis of the snap-back DNA of Pharbitis nil.

Authors: H Hirano; Y Komeda; T Iino
Journal: Plant Mol Biol Date: 1989-02 Impact factor: 4.076

10. RNA polymerase III dependence of the human L1 promoter and possible participation of the RNA polymerase II factor YY1 in the RNA polymerase III transcription system.

Authors: K Kurose; K Hata; M Hattori; Y Sakaki
Journal: Nucleic Acids Res Date: 1995-09-25 Impact factor: 16.971