Literature DB >> 488709

Maintenance of genetic variability under the pressure of neutral and deleterious mutations in a finite population.

W H Li.   

Abstract

In order to assess the effect of deleterious mutations on various measures of genic variation, approximate formulas have been developed for the frequency spectrum, the mean number of alleles in a sample, and the mean homozygosity; in some particular cases, exact formulas have been obtained. The assumptions made are that two classes of mutations exist, neutral and deleterious, and that selection is strong enough to keep deleterious alleles in low frequencies, the mode of selection being either genic or recessive. The main findings are: (1) If the expected value (q) of the sum of the frequencies of deleterious alleles is about 10% or less, then the presence of deleterious alleles causes only a minor reduction in the mean number of neutral alleles in a sample, as compared to the case of q = 0. Also, the low- and intermediate-frequency parts of the frequency spectrum of neutral alleles are little affected by the presence of deleterious alleles, though the high-frequency part may be changed drastically. (2) The contribution of deleterious mutations to the expected total number of alleles in a sample can be quite large even if q is only 1 or 2%. (3) The mean homozygosity is roughly equal to (1--2q)/(1 + theta 1), where theta 1 is twice the number of new neutral mutations occurring in each generation in the total population. Thus, deleterious mutations increase the mean heterozygosity by about 2q/(1 + theta 1). The present results have been applied to study the controversial problem of how deleterious mutations may affect the testing of the neutral mutation hypothesis.

Mesh:

Year:  1979        PMID: 488709      PMCID: PMC1213982     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  7 in total

1.  Role of very slightly deleterious mutations in molecular evolution and polymorphism.

Authors:  T Ohta
Journal:  Theor Popul Biol       Date:  1976-12       Impact factor: 1.570

2.  Infinite allele model with varying mutation rate.

Authors:  M Nei; R Chakraborty; P A Fuerst
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

3.  Variability in the amount of heterozygosity maintained by neutral mutations.

Authors:  F M Stewart
Journal:  Theor Popul Biol       Date:  1976-04       Impact factor: 1.570

Review 4.  Mutations affecting fitness in Drosophila populations.

Authors:  M J Simmons; J F Crow
Journal:  Annu Rev Genet       Date:  1977       Impact factor: 16.830

5.  Sampling variances of heterozygosity and genetic distance.

Authors:  M Nei; A K Roychoudhury
Journal:  Genetics       Date:  1974-02       Impact factor: 4.562

6.  Genetic variation in natural populations of five Drosophila species and the hypothesis of the selective neutrality of protein polymorphisms.

Authors:  F J Ayala; M L Tracey; L G Barr; J F McDonald; S Pérez-Salas
Journal:  Genetics       Date:  1974-06       Impact factor: 4.562

7.  Evolutionary rate at the molecular level.

Authors:  M Kimura
Journal:  Nature       Date:  1968-02-17       Impact factor: 49.962

  7 in total
  8 in total

1.  The homozygosity test after a change in population size.

Authors:  G A Watterson
Journal:  Genetics       Date:  1986-04       Impact factor: 4.562

2.  Very slightly deleterious mutations and the molecular clock.

Authors:  T Ohta
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

3.  The distribution of rare alleles.

Authors:  P Joyce; S Tavaré
Journal:  J Math Biol       Date:  1995       Impact factor: 2.259

4.  Allele frequencies with genic selection.

Authors:  R C Griffiths
Journal:  J Math Biol       Date:  1983       Impact factor: 2.259

5.  The structure of allelic diversity in the presence of purifying selection.

Authors:  Michael M Desai; Lauren E Nicolaisen; Aleksandra M Walczak; Joshua B Plotkin
Journal:  Theor Popul Biol       Date:  2011-12-16       Impact factor: 1.570

6.  Synonymous substitutions in the Xdh gene of Drosophila: heterogeneous distribution along the coding region.

Authors:  J M Comeron; M Aguadé
Journal:  Genetics       Date:  1996-11       Impact factor: 4.562

7.  Tumorigenesis as the Paradigm of Quasi-neutral Molecular Evolution.

Authors:  Bingjie Chen; Zongkun Shi; Qingjian Chen; Xu Shen; Darryl Shibata; Haijun Wen; Chung-I Wu
Journal:  Mol Biol Evol       Date:  2019-07-01       Impact factor: 16.240

8.  Generalization of the Ewens sampling formula to arbitrary fitness landscapes.

Authors:  Pavel Khromov; Constantin D Malliaris; Alexandre V Morozov
Journal:  PLoS One       Date:  2018-01-11       Impact factor: 3.240

  8 in total

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