Literature DB >> 6388571

Nucleotide sequence encoding the iron-sulphur protein subunit of the succinate dehydrogenase of Escherichia coli.

M G Darlison, J R Guest.   

Abstract

The nucleotide sequence of a 961 base-pair segment of DNA containing the sdhB gene, which encodes the iron-sulphur protein subunit of the E. coli succinate dehydrogenase, has been determined. The sdhB structural gene comprises 711 base pairs (237 codons, excluding the translational initiator and terminator). It is separated by a 15 base-pair intergenic region from the preceding flavoprotein gene (sdhA) and is the distal gene of an operon that also includes genes (sdhC and D) encoding two hydrophobic subunits, sdhCDAB. The distal end of the sdh operon is linked to the 2-oxoglutarate dehydrogenase gene (sucA) by a complex region of dyad symmetry that is homologous with several potential intercistronic regulatory elements or transcriptional attenuators. The sdhB structural gene encodes a polypeptide of Mr26637 that is strikingly homologous with the iron-sulphur protein subunit of fumarate reductase (38% identity, increasing to 58% when conservative changes are included). Both subunits contain 11 cysteine residues, 10 being conserved in three clusters resembling those found in ferredoxins. This work completes the sequence of a 9897 base-pair segment of DNA containing seven tricarboxylic acid cycle genes encoding three enzymes or enzyme complexes, citrate synthase (gltA), succinate dehydrogenase (sdh), and the 2-oxoglutarate dehydrogenase complex (suc), that are organized thus: gltA-sdhCDAB-sucAB.

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Year:  1984        PMID: 6388571      PMCID: PMC1144325          DOI: 10.1042/bj2230507

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  44 in total

1.  Close vicinity of IS1 integration sites in the leader sequence of the gal operon of E. coli.

Authors:  S Kühn; H J Fritz; P Starlinger
Journal:  Mol Gen Genet       Date:  1979-01-02

2.  A strategy of DNA sequencing employing computer programs.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1979-06-11       Impact factor: 16.971

3.  Proteins of the inner membrane of Escherichia coli: identification of succinate dehydrogenase by polyacrylamide gel electrophoresis with sdh amber mutants.

Authors:  M E Spencer; J R Guest
Journal:  J Bacteriol       Date:  1974-03       Impact factor: 3.490

4.  Proteins of the inner membrane of Escherichia coli: changes in composition associated with anaerobic growth and fumarate reductase amber mutation.

Authors:  M E Spencer; J R Guest
Journal:  J Bacteriol       Date:  1974-03       Impact factor: 3.490

5.  Non-heme iron proteins. IX. The amino acid sequence of ferredoxin from Micrococcus aerogenes.

Authors:  J N Tsunoda; K T Yasunobu; H R Whiteley
Journal:  J Biol Chem       Date:  1968-12-10       Impact factor: 5.157

6.  Analysis of restriction fragments of T7 DNA and determination of molecular weights by electrophoresis in neutral and alkaline gels.

Authors:  M W McDonell; M N Simon; F W Studier
Journal:  J Mol Biol       Date:  1977-02-15       Impact factor: 5.469

7.  The complete amino acid sequence of the Spirulina platensis ferredoxin.

Authors:  M Tanaka; M Haniu; K T Yasunobu
Journal:  Biochem Biophys Res Commun       Date:  1976-04-05       Impact factor: 3.575

8.  Purification, molecular properties, and amino acid composition of the subunits of Rhodospirillum rubrum succinate dehydrogenase.

Authors:  K A Davis; Y Hatefi; I P Crawford; H Baltscheffsky
Journal:  Arch Biochem Biophys       Date:  1977-04-30       Impact factor: 4.013

9.  Isolation and properties of fumarate reductase mutants of Escherichia coli.

Authors:  M E Spencer; J R Guest
Journal:  J Bacteriol       Date:  1973-05       Impact factor: 3.490

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  32 in total

1.  Nucleotide sequence of the FNR-regulated fumarase gene (fumB) of Escherichia coli K-12.

Authors:  P J Bell; S C Andrews; M N Sivak; J R Guest
Journal:  J Bacteriol       Date:  1989-06       Impact factor: 3.490

2.  Characterization of an operon encoding succinyl-CoA synthetase and malate dehydrogenase from Thermus flavus AT-62 and its expression in Escherichia coli.

Authors:  M Nishiyama; S Horinouchi; T Beppu
Journal:  Mol Gen Genet       Date:  1991-04

3.  Topography of succinate dehydrogenase in the mitochondrial inner membrane. A study using limited proteolysis and immunoblotting.

Authors:  G H Clarkson; J Neagle; J G Lindsay
Journal:  Biochem J       Date:  1991-02-01       Impact factor: 3.857

4.  Genes for two subunits of succinate dehydrogenase form a cluster on the mitochondrial genome of Rhodophyta.

Authors:  S Viehmann; O Richard; C Boyen; K Zetsche
Journal:  Curr Genet       Date:  1996-01       Impact factor: 3.886

Review 5.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

6.  Site-directed mutagenesis of conserved cysteine residues in Escherichia coli fumarate reductase: modification of the spectroscopic and electrochemical properties of the [2Fe-2S] cluster.

Authors:  M T Werth; G Cecchini; A Manodori; B A Ackrell; I Schröder; R P Gunsalus; M K Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

Review 7.  Linkage map of Escherichia coli K-12, edition 8.

Authors:  B J Bachmann
Journal:  Microbiol Rev       Date:  1990-06

8.  Close genetic relationship between Nitrobacter hamburgensis nitrite oxidoreductase and Escherichia coli nitrate reductases.

Authors:  K Kirstein; E Bock
Journal:  Arch Microbiol       Date:  1993       Impact factor: 2.552

9.  Aerobic inactivation of fumarate reductase from Escherichia coli by mutation of the [3Fe-4S]-quinone binding domain.

Authors:  G Cecchini; H Sices; I Schröder; R P Gunsalus
Journal:  J Bacteriol       Date:  1995-08       Impact factor: 3.490

10.  E. coli map. Physical map locations of genes encoding components of the aerobic respiratory chain of Escherichia coli.

Authors:  M W Calhoun; G Newton; R B Gennis
Journal:  J Bacteriol       Date:  1991-03       Impact factor: 3.490

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