Literature DB >> 364076

Model for DNA packaging into bacteriophage T4 heads.

L W Black, D J Silverman.   

Abstract

The mechanism of DNA packaging into bacteriophage T4 heads in vivo was investigated by glucosylation of hydroxymethylcytosine residues in a conditionally glucose-deficient host. Cytoplasmic DNA associated with partially packaged ts49 heads can be fully glucosylated, whereas DNA already packaged into these heads is shown to be resistant to glucosylation. After temperature shift and completion of arrested packaging into the reversible temperature-sensitive ts49 head, the structure of the DNA in the mature ts49 phage was investigated by restriction enzyme digestion, autoradiography, and other techniques. Such mature DNA appears to be fully glucosylated along part of its length and nonglucosylated on the remainder. Its structure suggests that the DNA is run into the head linearly and unidirectionally from one mature end and that there is little sequence specificity in that portion of the T4 DNA which first enters the capsid. This technique should be useful in investigation of the three-dimensional structure of first- and last-packaged DNA within the head; preliminary studies including autoradiography of osmotically shocked phage suggest that the DNA which first enters the head is deposited toward the center of the capsid and that the end of the DNA which first enters the head exits first upon injection. In conjunction with studies of the structure of condensed DNA, the positions and functions of T4 capsid proteins in DNA packaging, and the order of T4 packaging functions [Earnshaw and Harrison, Nature (London) 268:598-602, 1977; Hsiao and Black, Proc. Natl. Acad. Sci. U.S.A. 74:3652-3656, 1977; Müller-Salamin et al., J. Virol. 24:121-134, 1977; Richards et al., J. Mol. Biol. 78:255-259, 1973], the features described above suggest the following model: the first DNA end is fixed to the proximal apex of the head at p20 and the DNA is then pumped into the head enzymatically by proteins (p20 + p17) which induce torsion in the DNA molecule.

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Year:  1978        PMID: 364076      PMCID: PMC354311     

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  36 in total

1.  Studies on the maturation of the head of bacteriophage T4.

Authors:  J Wagner; U K Laemmli
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1976-11-30       Impact factor: 6.237

2.  Endonuclease of T4 ghosts.

Authors:  T Minagawa
Journal:  Virology       Date:  1977-01       Impact factor: 3.616

3.  [Preparation and length measurements of the total desoxyribonucleic acid content of T2 bacteriophages].

Authors:  A K KLEINSCHMIDT; D LANG; D JACHERTS; R K ZAHN
Journal:  Biochim Biophys Acta       Date:  1962-12-31

4.  The effects of the decay of incorporated radioactive phosphorus on the genome of bacteriophage T4.

Authors:  F W STAHL
Journal:  Virology       Date:  1956-04       Impact factor: 3.616

5.  DNA gyrase: an enzyme that introduces superhelical turns into DNA.

Authors:  M Gellert; K Mizuuchi; M H O'Dea; H A Nash
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

6.  Localization of minor protein components of the head of bacteriophage T4.

Authors:  L Müller-Salamin; L Onorato; M K Showe
Journal:  J Virol       Date:  1977-10       Impact factor: 5.103

7.  DNA arrangement in isometric phage heads.

Authors:  W C Earnshaw; S C Harrison
Journal:  Nature       Date:  1977-08-18       Impact factor: 49.962

8.  Acridine-resistance in phage T4D.

Authors:  M M Piechowski; M Susman
Journal:  Genetics       Date:  1967-05       Impact factor: 4.562

9.  Studies related to the head-maturation pathway of bacteriophages T4 and T2:I. morphology and kinetics of intracellular particles produced by mutants in the maturation genes.

Authors:  H Wunderli; J vd Broek; E Kellenberger
Journal:  J Supramol Struct       Date:  1977

10.  DNA packaging and the pathway of bacteriophage T4 head assembly.

Authors:  C L Hsiao; L W Black
Journal:  Proc Natl Acad Sci U S A       Date:  1977-09       Impact factor: 11.205

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  29 in total

Review 1.  Old, new, and widely true: The bacteriophage T4 DNA packaging mechanism.

Authors:  Lindsay W Black
Journal:  Virology       Date:  2015-02-27       Impact factor: 3.616

2.  Single phage T4 DNA packaging motors exhibit large force generation, high velocity, and dynamic variability.

Authors:  Derek N Fuller; Dorian M Raymer; Vishal I Kottadiel; Venigalla B Rao; Douglas E Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-17       Impact factor: 11.205

Review 3.  Packaging double-helical DNA into viral capsids: structures, forces, and energetics.

Authors:  Anton S Petrov; Stephen C Harvey
Journal:  Biophys J       Date:  2008-05-16       Impact factor: 4.033

4.  A docking model based on mass spectrometric and biochemical data describes phage packaging motor incorporation.

Authors:  Chi-yu Fu; Charlotte Uetrecht; Sebyung Kang; Marc C Morais; Albert J R Heck; Mark R Walter; Peter E Prevelige
Journal:  Mol Cell Proteomics       Date:  2010-02-02       Impact factor: 5.911

Review 5.  The DNA-packaging nanomotor of tailed bacteriophages.

Authors:  Sherwood R Casjens
Journal:  Nat Rev Microbiol       Date:  2011-08-12       Impact factor: 60.633

6.  Topoisomerase II and other DNA-delay and DNA-arrest mutations impair bacteriophage T4 DNA packaging in vivo and in vitro.

Authors:  A Zachary; L W Black
Journal:  J Virol       Date:  1986-10       Impact factor: 5.103

Review 7.  Popping the cork: mechanisms of phage genome ejection.

Authors:  Ian J Molineux; Debabrata Panja
Journal:  Nat Rev Microbiol       Date:  2013-02-04       Impact factor: 60.633

8.  End structure and mechanism of packaging of bacteriophage T4 DNA.

Authors:  A Kalinski; L W Black
Journal:  J Virol       Date:  1986-06       Impact factor: 5.103

9.  Single-molecule and FRET fluorescence correlation spectroscopy analyses of phage DNA packaging: colocalization of packaged phage T4 DNA ends within the capsid.

Authors:  Krishanu Ray; Jinxia Ma; Mark Oram; Joseph R Lakowicz; Lindsay W Black
Journal:  J Mol Biol       Date:  2009-12-04       Impact factor: 5.469

10.  Modulation of the packaging reaction of bacteriophage t4 terminase by DNA structure.

Authors:  Mark Oram; Chandran Sabanayagam; Lindsay W Black
Journal:  J Mol Biol       Date:  2008-06-05       Impact factor: 5.469

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