Literature DB >> 36068458

Target Discovery for Drug Development Using Mendelian Randomization.

Daniel S Evans1,2.   

Abstract

Making drug development more efficient by identifying promising drug targets can contribute to resource savings. Identifying promising drug targets using human genetic approaches can remove barriers related to translation. In addition, genetic information can be used to identify potentially causal relationships between a drug target and disease. Mendelian randomization (MR) is a class of approaches used to identify causal associations between pairs of genetically predicted traits using data from human genetic studies. MR can be used to prioritize candidate drug targets by predicting disease outcomes and adverse events that could result from the manipulation of a drug target. The theory behind MR is reviewed, including a discussion of MR assumptions, different MR analytical methods, tests for violations of assumptions, and MR methods that can be robust to some violations of MR assumptions. A protocol to perform two-sample MR (2SMR) with summary genome-wide association study (GWAS) results is described. An example of 2SMR examining the causal relationship between low-density lipoprotein (LDL) and coronary artery disease (CAD) is provided as an illustration of the protocol.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  GWAS; Genetics; Instrumental variables; Mendelian randomization; Target discovery

Mesh:

Year:  2022        PMID: 36068458     DOI: 10.1007/978-1-0716-2573-6_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  49 in total

1.  Data dredging, bias, or confounding.

Authors:  George Davey Smith; Shah Ebrahim
Journal:  BMJ       Date:  2002-12-21

2.  An integrative genomics approach to infer causal associations between gene expression and disease.

Authors:  Eric E Schadt; John Lamb; Xia Yang; Jun Zhu; Steve Edwards; Debraj Guhathakurta; Solveig K Sieberts; Stephanie Monks; Marc Reitman; Chunsheng Zhang; Pek Yee Lum; Amy Leonardson; Rolf Thieringer; Joseph M Metzger; Liming Yang; John Castle; Haoyuan Zhu; Shera F Kash; Thomas A Drake; Alan Sachs; Aldons J Lusis
Journal:  Nat Genet       Date:  2005-06-19       Impact factor: 38.330

Review 3.  Comparison of treatment effects between animal experiments and clinical trials: systematic review.

Authors:  Pablo Perel; Ian Roberts; Emily Sena; Philipa Wheble; Catherine Briscoe; Peter Sandercock; Malcolm Macleod; Luciano E Mignini; Pradeep Jayaram; Khalid S Khan
Journal:  BMJ       Date:  2006-12-15

Review 4.  Trends in risks associated with new drug development: success rates for investigational drugs.

Authors:  J A DiMasi; L Feldman; A Seckler; A Wilson
Journal:  Clin Pharmacol Ther       Date:  2010-02-03       Impact factor: 6.875

5.  Invited commentary: interpreting associations between exposure biomarkers and pregnancy outcome.

Authors:  David A Savitz
Journal:  Am J Epidemiol       Date:  2014-01-08       Impact factor: 4.897

6.  Clinical development success rates for investigational drugs.

Authors:  Michael Hay; David W Thomas; John L Craighead; Celia Economides; Jesse Rosenthal
Journal:  Nat Biotechnol       Date:  2014-01       Impact factor: 54.908

Review 7.  Experimental Design in Clinical 'Omics Biomarker Discovery.

Authors:  Jenny Forshed
Journal:  J Proteome Res       Date:  2017-11-03       Impact factor: 4.466

8.  Extrapolating from animals to humans.

Authors:  John P A Ioannidis
Journal:  Sci Transl Med       Date:  2012-09-12       Impact factor: 17.956

Review 9.  Validating therapeutic targets through human genetics.

Authors:  Robert M Plenge; Edward M Scolnick; David Altshuler
Journal:  Nat Rev Drug Discov       Date:  2013-07-19       Impact factor: 84.694

Review 10.  Mendelian randomisation in cardiovascular research: an introduction for clinicians.

Authors:  Derrick A Bennett; Michael V Holmes
Journal:  Heart       Date:  2017-06-08       Impact factor: 5.994

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.