| Literature DB >> 36057788 |
Yan Liu1, Maojun Zhang1, Zhiwei Zhong1, Xiangrong Zeng1.
Abstract
BACKGROUND: Most of existing deep learning research in medical image analysis is focused on networks with stronger performance. These networks have achieved success, while their architectures are complex and even contain massive parameters ranging from thousands to millions in numbers. The nature of high dimension and nonconvex makes it easy to train a suboptimal model through the popular stochastic first-order optimizers, which only use gradient information.Entities:
Keywords: cubic quasi-Newton optimizer; high-order moment; medical image analysis
Year: 2022 PMID: 36057788 PMCID: PMC9538560 DOI: 10.1002/mp.15969
Source DB: PubMed Journal: Med Phys ISSN: 0094-2405 Impact factor: 4.506
Test accuracy of COVID‐Net with COVID‐chestxray
| Backbone (%) | Adam | SGD | AdaBound | Apollo | ACQN‐H |
|---|---|---|---|---|---|
| VGG16 | 95.44 | 95.44 | 96.25 | 96.36 | 96.74 |
| ResNet50 | 94.41 | 94.19 | 95.49 | 95.44 | 95.60 |
| DenseNet121 | 95.17 | 95.27 | 95.82 | 96.36 | 96.52 |
FIGURE 1Test accuracy curves of COVID‐Net on COVID‐chestxray using VGG16, ResNet50, and DenseNet121 as backbone
Quantitative results of fivefold cross‐validation using COVID‐Net with COVID‐chestxray
| Validation set | Test Set | |||||
|---|---|---|---|---|---|---|
| Backbone(%) | VGG16 | ResNet50 | DenseNet121 | VGG16 | ResNet50 | DenseNet121 |
| Fold‐0 | 99.01 | 98.95 | 99.21 | 97.21 | 95.95 | 97.61 |
| Fold‐1 | 98.55 | 98.15 | 98.65 | 96.05 | 95.15 | 95.97 |
| Fold‐2 | 97.62 | 98.02 | 98.82 | 95.92 | 95.32 | 96.32 |
| Fold‐3 | 97.86 | 97.36 | 97.93 | 97.86 | 95.36 | 97.13 |
| Fold‐4 | 98.66 | 97.72 | 98.54 | 96.66 | 96.22 | 95.57 |
| Avg | 98.34 | 98.04 | 98.63 | 96.74 | 95.60 | 96.52 |
Assessment of Inf‐Net with COVID‐CT. (For metric MAE, lower is better, for other metrics, higher is better)
| (%) | Adam | SGD | AdaBound | Apollo | ACQN‐H |
|---|---|---|---|---|---|
| Dice | 68.7 | 57.4 | 64.8 | 69.0 | 70.0 |
| TPR | 68.1 | 79.2 | 65.9 | 68.2 | 68.4 |
| TNR | 94.9 | 85.7 | 94.3 | 95.6 | 95.4 |
| SM | 76.5 | 63.8 | 75.0 | 76.9 | 76.0 |
| EM | 84.9 | 72.4 | 83.8 | 87.3 | 88.7 |
| MAE | 7.7 | 14.9 | 8.9 | 7.7 | 7.4 |
FIGURE 2Segmentation results on COVID‐CT with Inf‐Net
Quantitative results of fivefold cross‐validation using COVID‐CT with Inf‐Net
| % | Validation set | Test set |
|---|---|---|
| Fold‐0 | 78.50 ± 0.10 | 68.51 ± 0.57 |
| Fold‐1 | 77.90 ± 0.14 | 70.87 ± 0.47 |
| Fold‐2 | 79.71 ± 0.10 | 65.45 ± 0.90 |
| Fold‐3 | 80.17 ± 0.10 | 73.31 ± 0.65 |
| Fold‐4 | 81.77 ± 0.07 | 71.86 ± 0.62 |
| Avg. | 79.61 ± 0.11 | 70.02 ± 0.59 |
Assessment of ResUNet on LiTS2017. (For Dice, higher is better, while for other evaluation metrics, lower is better)
| (%) | Adam | SGD | AdaBound | Apollo |
|
|---|---|---|---|---|---|
| Dice | 91.22 | 90.87 | 90.62 | 91.20 |
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| TPR | 97.53 | 98.48 | 98.40 |
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| TNR | 86.90 | 84.77 | 84.80 | 85.37 |
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| IoU | 84.43 | 83.58 | 83.20 | 84.14 |
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FIGURE 3Segmentation results on LiTS2017 with ResUNet. The red pixels denote the liver region.
Quantitative results of fivefold Cross‐validation using ResUNet with LiTS2017
| % | Validation set | Test set |
|---|---|---|
| Fold‐0 | 95.03 ± 0.09 | 94.04 ± 0.04 |
| Fold‐1 | 95.12 ± 0.09 | 93.13 ± 0.04 |
| Fold‐2 | 96.68 ± 0.09 | 94.01 ± 0.04 |
| Fold‐3 | 95.45 ± 0.09 | 93.11 ± 0.04 |
| Fold‐4 | 95.72 ± 0.09 | 93.01 ± 0.04 |
| Avg | 95.60 ± 0.09 | 93.46 ± 0.04 |
Assessment of MRNet with RIGA. (Higher is better)
| (%) | Adam | SGD | AdaBound | Apollo |
|
|---|---|---|---|---|---|
| Disc Dice | 94.9 |
| 97.5 | 97.6 | 97.6 |
| Disc IoU | 90.5 |
| 95.1 | 95.3 | 95.4 |
| Cup Dice | 83.3 | 83.3 | 81.9 | 83.2 |
|
| Cup IoU | 73.2 | 73.2 | 71.5 | 72.9 | 7 |
FIGURE 4A sample of segmentation result on RIGA with MRNet. (a) represents the original image (above) and ground truth (below). The segmentation boundaries of GT (green) and the predicted optic disc (red) for different optimizers are shown in the first row of (b)–(f), while the results of cup segmentation are shown in the second row.
Quantitative results of fivefold Cross‐validation using MRNet with RIGA
| Optic disc | Optic cup | |||
|---|---|---|---|---|
| Subtask (%) | Validation set | Test set | Validation set | Test Set |
| Fold‐0 | 99.01 ± 0.02 | 97.81 ± 0.02 | 88.36 ± 0.14 | 84.24 ± 0.68 |
| Fold‐1 | 98.70 ± 0.03 | 97.15 ± 0.02 | 88.18 ± 0.14 | 82.31 ± 0.71 |
| Fold‐2 | 98.57 ± 0.01 | 96.47 ± 0.02 | 86.97 ± 0.10 | 83.55 ± 0.62 |
| Fold‐3 | 99.25 ± 0.01 | 98.32 ± 0.02 | 86.13 ± 0.14 | 83.97 ± 0.53 |
| Fold‐4 | 99.07 ± 0.01 | 98.25 ± 0.01 | 87.61 ± 0.17 | 84.93 ± 0.57 |
| Avg | 98.92 ± 0.02 | 97.60 ± 0.02 | 87.45 ± 0.15 | 83.81 ± 0.64 |
FIGURE 5The violin plots present the dice of different optimizers for COVID‐19 lung infection segmentation, liver tumor segmentation, and optic disc/cup segmentation.
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