Literature DB >> 32613207

UNet++: A Nested U-Net Architecture for Medical Image Segmentation.

Zongwei Zhou1, Md Mahfuzur Rahman Siddiquee1, Nima Tajbakhsh1, Jianming Liang1.   

Abstract

In this paper, we present UNet++, a new, more powerful architecture for medical image segmentation. Our architecture is essentially a deeply-supervised encoder-decoder network where the encoder and decoder sub-networks are connected through a series of nested, dense skip pathways. The re-designed skip pathways aim at reducing the semantic gap between the feature maps of the encoder and decoder sub-networks. We argue that the optimizer would deal with an easier learning task when the feature maps from the decoder and encoder networks are semantically similar. We have evaluated UNet++ in comparison with U-Net and wide U-Net architectures across multiple medical image segmentation tasks: nodule segmentation in the low-dose CT scans of chest, nuclei segmentation in the microscopy images, liver segmentation in abdominal CT scans, and polyp segmentation in colonoscopy videos. Our experiments demonstrate that UNet++ with deep supervision achieves an average IoU gain of 3.9 and 3.4 points over U-Net and wide U-Net, respectively.

Entities:  

Year:  2018        PMID: 32613207      PMCID: PMC7329239          DOI: 10.1007/978-3-030-00889-5_1

Source DB:  PubMed          Journal:  Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018)


  4 in total

1.  Convolutional Neural Networks for Medical Image Analysis: Full Training or Fine Tuning?

Authors:  Nima Tajbakhsh; Jae Y Shin; Suryakanth R Gurudu; R Todd Hurst; Christopher B Kendall; Michael B Gotway
Journal:  IEEE Trans Med Imaging       Date:  2016-03-07       Impact factor: 10.048

2.  The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI): a completed reference database of lung nodules on CT scans.

Authors:  Samuel G Armato; Geoffrey McLennan; Luc Bidaut; Michael F McNitt-Gray; Charles R Meyer; Anthony P Reeves; Binsheng Zhao; Denise R Aberle; Claudia I Henschke; Eric A Hoffman; Ella A Kazerooni; Heber MacMahon; Edwin J R Van Beeke; David Yankelevitz; Alberto M Biancardi; Peyton H Bland; Matthew S Brown; Roger M Engelmann; Gary E Laderach; Daniel Max; Richard C Pais; David P Y Qing; Rachael Y Roberts; Amanda R Smith; Adam Starkey; Poonam Batrah; Philip Caligiuri; Ali Farooqi; Gregory W Gladish; C Matilda Jude; Reginald F Munden; Iva Petkovska; Leslie E Quint; Lawrence H Schwartz; Baskaran Sundaram; Lori E Dodd; Charles Fenimore; David Gur; Nicholas Petrick; John Freymann; Justin Kirby; Brian Hughes; Alessi Vande Casteele; Sangeeta Gupte; Maha Sallamm; Michael D Heath; Michael H Kuhn; Ekta Dharaiya; Richard Burns; David S Fryd; Marcos Salganicoff; Vikram Anand; Uri Shreter; Stephen Vastagh; Barbara Y Croft
Journal:  Med Phys       Date:  2011-02       Impact factor: 4.071

3.  Fine-tuning Convolutional Neural Networks for Biomedical Image Analysis: Actively and Incrementally.

Authors:  Zongwei Zhou; Jae Shin; Lei Zhang; Suryakanth Gurudu; Michael Gotway; Jianming Liang
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2017-11-09

4.  H-DenseUNet: Hybrid Densely Connected UNet for Liver and Tumor Segmentation From CT Volumes.

Authors:  Xiaomeng Li; Hao Chen; Xiaojuan Qi; Qi Dou; Chi-Wing Fu; Pheng-Ann Heng
Journal:  IEEE Trans Med Imaging       Date:  2018-06-11       Impact factor: 10.048

  4 in total
  250 in total

1.  Multi-Organ Segmentation Over Partially Labeled Datasets With Multi-Scale Feature Abstraction.

Authors:  Xi Fang; Pingkun Yan
Journal:  IEEE Trans Med Imaging       Date:  2020-10-28       Impact factor: 10.048

2.  UNet++: Redesigning Skip Connections to Exploit Multiscale Features in Image Segmentation.

Authors:  Zongwei Zhou; Md Mahfuzur Rahman Siddiquee; Nima Tajbakhsh; Jianming Liang
Journal:  IEEE Trans Med Imaging       Date:  2019-12-13       Impact factor: 10.048

3.  Modified U-Net (mU-Net) With Incorporation of Object-Dependent High Level Features for Improved Liver and Liver-Tumor Segmentation in CT Images.

Authors:  Hyunseok Seo; Charles Huang; Maxime Bassenne; Ruoxiu Xiao; Lei Xing
Journal:  IEEE Trans Med Imaging       Date:  2019-10-18       Impact factor: 10.048

4.  Self-Ensembling Co-Training Framework for Semi-Supervised COVID-19 CT Segmentation.

Authors:  Caizi Li; Li Dong; Qi Dou; Fan Lin; Kebao Zhang; Zuxin Feng; Weixin Si; Xuesong Deng; Zhe Deng; Pheng-Ann Heng
Journal:  IEEE J Biomed Health Inform       Date:  2021-11-05       Impact factor: 5.772

5.  Fast meningioma segmentation in T1-weighted magnetic resonance imaging volumes using a lightweight 3D deep learning architecture.

Authors:  David Bouget; André Pedersen; Sayied Abdol Mohieb Hosainey; Johanna Vanel; Ole Solheim; Ingerid Reinertsen
Journal:  J Med Imaging (Bellingham)       Date:  2021-03-26

Review 6.  Machine learning techniques for biomedical image segmentation: An overview of technical aspects and introduction to state-of-art applications.

Authors:  Hyunseok Seo; Masoud Badiei Khuzani; Varun Vasudevan; Charles Huang; Hongyi Ren; Ruoxiu Xiao; Xiao Jia; Lei Xing
Journal:  Med Phys       Date:  2020-06       Impact factor: 4.071

7.  Segmentation of cellular patterns in confocal images of melanocytic lesions in vivo via a multiscale encoder-decoder network (MED-Net).

Authors:  Kivanc Kose; Alican Bozkurt; Christi Alessi-Fox; Melissa Gill; Caterina Longo; Giovanni Pellacani; Jennifer G Dy; Dana H Brooks; Milind Rajadhyaksha
Journal:  Med Image Anal       Date:  2020-10-07       Impact factor: 8.545

8.  A new strategy to map landslides with a generalized convolutional neural network.

Authors:  Nikhil Prakash; Andrea Manconi; Simon Loew
Journal:  Sci Rep       Date:  2021-05-06       Impact factor: 4.996

9.  Deep Learning Based Real-time Speech Enhancement for Dual-microphone Mobile Phones.

Authors:  Ke Tan; Xueliang Zhang; DeLiang Wang
Journal:  IEEE/ACM Trans Audio Speech Lang Process       Date:  2021-05-21

10.  Multi-Scale Squeeze U-SegNet with Multi Global Attention for Brain MRI Segmentation.

Authors:  Chaitra Dayananda; Jae-Young Choi; Bumshik Lee
Journal:  Sensors (Basel)       Date:  2021-05-12       Impact factor: 3.576

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