| Literature DB >> 36056431 |
Jing Tian1,2, Lei Cheng3, Enqi Kong4, Wenjin Gu5, Yuanyuan Jiang5, Quan Hao1,2, Beihua Kong6, Li Sun7.
Abstract
BACKGROUND: Chemoresistance is one of the major obstacles that lead to poor prognosis in cervical cancer. linc00958 was reported to be an oncogene in cervical cancer. However, its role in mediating chemoresistance remains to be revealed.Entities:
Keywords: Angiogenesis; Cervical cancer; Cisplatin resistance; Linc00958
Mesh:
Substances:
Year: 2022 PMID: 36056431 PMCID: PMC9438131 DOI: 10.1186/s12958-022-00995-2
Source DB: PubMed Journal: Reprod Biol Endocrinol ISSN: 1477-7827 Impact factor: 4.982
The top differently exprssed lncRNAs in cervical cancer based on Gepia database
| GeneSymbol | Gene ID | Log2(Fold change) | Adjusted P value |
|---|---|---|---|
| LINC00925 | ENSG00000255571.6 | 3.691 | 7.19E-10 |
| LINC00958 | ENSG00000251381.6 | 3.544 | 3.77E-08 |
| LINC00511 | ENSG00000227036.6 | 3.512 | 6.06E-22 |
| LINC01133 | ENSG00000224259.5 | 2.673 | 1.05E-03 |
| LINC00467 | ENSG00000153363.12 | 1.833 | 7.61E-09 |
| LINC00152 | ENSG00000222041.10 | 1.643 | 3.48E-10 |
| LINC00960 | ENSG00000242516.1 | -1.537 | 1.46E-03 |
| LINC00883 | ENSG00000243701.5 | -1.592 | 7.93E-11 |
| LINC00173 | ENSG00000196668.3 | -1.606 | 2.37E-09 |
| LINC00092 | ENSG00000225194.2 | -1.641 | 5.27E-24 |
| LINC00926 | ENSG00000247982.6 | -1.663 | 3.95E-19 |
| LINC00265 | ENSG00000188185.11 | -1.664 | 4.97E-13 |
| LINC00115 | ENSG00000225880.5 | -1.713 | 1.98E-13 |
| LINC01355 | ENSG00000261326.2 | -1.732 | 5.73E-10 |
| LINC00989 | ENSG00000250334.5 | -1.789 | 1.80E-56 |
| LINC01125 | ENSG00000228486.9 | -1.805 | 3.78E-07 |
| LINC01140 | ENSG00000267272.5 | -1.85 | 1.75E-22 |
| LINC01341 | ENSG00000227953.6 | -1.864 | 4.20E-08 |
| LINC00893 | ENSG00000241769.7 | -1.888 | 2.31E-07 |
| LINC00894 | ENSG00000235703.5 | -2.033 | 6.45E-11 |
| LINC00899 | ENSG00000231711.2 | -2.04 | 1.20E-16 |
| LINC01139 | ENSG00000215808.2 | -2.107 | 2.92E-03 |
| LINC01089 | ENSG00000212694.8 | -2.287 | 4.38E-12 |
| LINC01197 | ENSG00000248441.6 | -2.319 | 2.38E-58 |
| LINC00890 | ENSG00000260802.1 | -2.319 | 2.88E-24 |
| LINC01016 | ENSG00000249346.6 | -2.345 | 4.48E-52 |
| LINC00702 | ENSG00000233117.2 | -2.384 | 4.22E-19 |
| LINC00908 | ENSG00000263812.5 | -2.533 | 3.32E-22 |
| LINC00844 | ENSG00000237949.1 | -2.642 | 8.44E-64 |
| LINC-PINT | ENSG00000231721.6 | -2.776 | 1.69E-26 |
| LINC01088 | ENSG00000249307.5 | -3.456 | 4.83E-23 |
primer sequences
| LINC00958-Fwd | AGACGCCAGGTAGCTTCTTC |
|---|---|
| LINC00958-Rev | AGGCTGGAGCCCATCCATTA |
| RSF1-Fwd | GGCTACACCGGATTGAGACGGATGA |
| RSF1-Rev | AGGGCTCTGTCCATTGGTTGAAGG |
| AKT1-Fwd | GGACAAGGACGGGCACATTA |
| AKT1-Rev | CGACCGCACATCATCTCGTA |
| GSK3β-Fwd | CCTTGGACTAAGGTCTTCCGA |
| GSK3β-Rev | ATGGTAGCCAGAGGTGGATTA |
| VEGFA-Fwd | TTCAAGCCATCCTGTGTGCC |
| VEGFA-Rev | CACCAACGTACACGCTCCA |
| GAPDH-Fwd | ACCACAGTCCATGCCATCAC |
| GAPDH-Rev | TCCACCACCCTGTTGCTGTA |
| miR-185-5p-RT | GTCGTATCCAGTGCAGGGTCCGAGGTGCACTGGATACGACTCAGGAAC |
| miR-185-5p-Fwd | TGCGG TGGAGAGAAAGGCAGTTC |
| U6-RT | GTCGTATCCAGTGCAGGGTCCGAGGTGCACTGGATACGACAAAATATGG |
| U6-Fwd | TGCGGGTGCTCGCTTCGGCAGC |
| U6-Reverse | CCAGTGCAGGGTCCGAGGT |
Antibodies used in western blot and IHC experiments
| Name | Cat number | Dilution rate | Source |
|---|---|---|---|
| Anti-Phospho-Akt1(Ser473) | bsm-52130R | 1:200 | Bioss |
| Anti-phospho-AKT (Ser473) | bs-0876R | 1:200 | Bioss |
| Anti-AKT | bsm-33278 M | 1:200 | Bioss |
| Anti-phospho-GAK3β | bs-2066R | 1:200 | Bioss |
| Anti-GAK3β | bs-0023 M | 1:200 | Bioss |
| Anti-VEGFA | bs-20393R | 1:200 | Bioss |
| Anti-RSF-1 | bs-18867R | 1:200 | Bioss |
| Anti-Ki67 | bs-23103R | 1:200 | Bioss |
| Anti-CD34 | bs-8996R | 1:200 | Bioss |
| Anti-beta-actin | bs-0061R | 1: 2000 | Bioss |
| Goat anti-rabbit | bs-0295G | 1: 6000 | Bioss |
| Goat anti-mouse | bs-0296G | 1: 6000 | Bioss |
Fig. 1Downregulation of linc00958 decreased cisplatin resistance in cervical cancer cells. A Gepia database provided the differentially expressed genes (DEG) in cervical cancer tissues. We screened the top DEGs in Excel and generated the bar graph. B Gepia online tool showed the expression of linc00958 in cancers. C GEO profile was used to analyze whether linc00958 was associated with the lymph nodes in CC patients. D-E Differential expression of linc00958 in CC; Overall survival curve in correlation to linc00958 in CC (Gepia). F-H CCK8 was used to evaluate the cisplatin resistance in SiHa, SiHa/DDP before and after the knockdown of linc00958
Fig. 2The interactions between linc00958/miR-185-5p/RSF-1 in cervical cancer cells. A-B RNAInter was applied to predict cisplatin targets and also miR-185-5p and RSF-1. C-D Starbase database provided the putative binding sites between miR-185-5p and RSF-1/linc00958. E–F Luciferase reporter gene assays. G-I&K-L RT-qPCR measured RNA levels of miR-185-5p/RSF-1 in SiHa and SiHa/DDP cells, in SiHa/DDP cells with loss or gain of linc00958. Western blot measured RSF-1 protein expression. J Spearman’s correlation analysis between linc00958 and RSF-1 in CC tissues on Gepia. M–N Impact of miR-185-5p upregulation on RSF-1. O-P CCK8 evaluated the cisplatin resistance in SiHa/DDP cells with loss of RSF-1 or gain of miR-185-5p. ****P < 0.0001, ***P = < 0.0002, **P < 0.002, *P < 0.03
Fig. 3linc00958/miR-185-5p/RSF-1 modulates the AKT1/GSK3β pathway and VEGFA. A-B Spearman’s correlation analysis between RSF-1 and AKT1/GSK3β (Gepia). C-P Cells were transfected to regulate the expression of linc00958/miR-185-5p/RSF-1. RT-qPCR measured the mRNA expression of AKT1 and GSK3β while western blot detected the protein levels of phospho-AKT1(ser473), phosphor-AKT (ser473), AKT, phosphor-GSK3β and GSK3β. ****P < 0.0001, ***P = < 0.0002, **P < 0.002, *P < 0.03
Fig. 4linc00958/miR-185-5p/RSF-1 axis modulated tube formation through VEGFA pathway. A Spearman’s correlation analysis between RSF-1 and VEGFA in CC(Gepia). B Overall survival in association with VEGFA mRNA expression in CC patients (Gepia). C-E Immunofluorescence assays to observe VEGFA secretion in SiHa cells. F-L Tube formation assays. **P < 0.002
Fig. 5linc00958 downregulation inhibited the tumor growth and angiogenesis in xenograft model. A Images of xenograft mice and derived tumors. B Tumor weight. C-D Weight curve of mice and tumor volume since the first day when tumors could be detected. E H&E staining. F-I IHC measured the changes of RSF-1, Ki67, VEGFA and CD34. Scale: 100um. ****P < 0.0001.*P < 0.03