Literature DB >> 16220961

Temperature dependence of domain motions of calmodulin probed by NMR relaxation at multiple fields.

Shou-Lin Chang1, Attila Szabo, Nico Tjandra.   

Abstract

Interdomain motions of Ca(2+)-ligated calmodulin were characterized by analyzing the nuclear magnetic resonance (15)N longitudinal relaxation rate R(1), transverse relaxation rate R(2), and steady-state {(1)H}-(15)N NOE of the backbone amide group at three different magnetic field strengths (18.8, 14.1, and 8.5 T) and four different temperatures (21, 27, 35, and 43 degrees C). Between 35 and 43 degrees C, a larger than expected change in the amplitude and the time scale of the interdomain motion for both N- and C-domains was observed. We attribute this to the shift in population of four residues (74-77) in the central linker from predominantly helical to random coil in this temperature range. This is consistent with the conformation of these residues in the calmodulin-peptide complex, where they are nonhelical. The doubling of the disordered region of the central helix (residues 78-81 at room temperature) when temperature is raised from 35 to 43 degrees C results in larger amplitude interdomain motion. Our analysis of the NMR relaxation data quantifies subtle changes in the interdomain dynamics and provides an additional tool to monitor conformational changes in multidomain proteins.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 16220961     DOI: 10.1021/ja034064w

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  23 in total

1.  Experimentally exploring the conformational space sampled by domain reorientation in calmodulin.

Authors:  Ivano Bertini; Cristina Del Bianco; Ioannis Gelis; Nikolaus Katsaros; Claudio Luchinat; Giacomo Parigi; Massimiliano Peana; Alessandro Provenzani; Maria Antonietta Zoroddu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-20       Impact factor: 11.205

2.  Coupling between internal dynamics and rotational diffusion in the presence of exchange between discrete molecular conformations.

Authors:  Yaroslav Ryabov; G Marius Clore; Charles D Schwieters
Journal:  J Chem Phys       Date:  2012-01-21       Impact factor: 3.488

3.  NMR studies on domain diffusion and alignment in modular GB1 repeats.

Authors:  Joseph D Walsh; Katlyn Meier; Rieko Ishima; Angela M Gronenborn
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

Review 4.  Structural dynamics of bio-macromolecules by NMR: the slowly relaxing local structure approach.

Authors:  Eva Meirovitch; Yury E Shapiro; Antonino Polimeno; Jack H Freed
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05       Impact factor: 9.795

5.  Protein dynamics from NMR: the slowly relaxing local structure analysis compared with model-free analysis.

Authors:  Eva Meirovitch; Yury E Shapiro; Antonino Polimeno; Jack H Freed
Journal:  J Phys Chem A       Date:  2006-07-13       Impact factor: 2.781

6.  A theory of protein dynamics to predict NMR relaxation.

Authors:  Esther Caballero-Manrique; Jenelle K Bray; William A Deutschman; Frederick W Dahlquist; Marina G Guenza
Journal:  Biophys J       Date:  2007-08-31       Impact factor: 4.033

7.  Structural insights into activation of the retinal L-type Ca²⁺ channel (Cav1.4) by Ca²⁺-binding protein 4 (CaBP4).

Authors:  Saebomi Park; Congmin Li; Françoise Haeseleer; Krzysztof Palczewski; James B Ames
Journal:  J Biol Chem       Date:  2014-09-25       Impact factor: 5.157

8.  A rigid disulfide-linked nitroxide side chain simplifies the quantitative analysis of PRE data.

Authors:  Nicolas L Fawzi; Mark R Fleissner; Nicholas J Anthis; Tamás Kálai; Kálmán Hideg; Wayne L Hubbell; G Marius Clore
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

9.  Decoding the components of dynamics in three-domain proteins.

Authors:  Mateusz Maciejewski; Paul N Barlow; Nico Tjandra
Journal:  J Comput Chem       Date:  2013-12-09       Impact factor: 3.376

10.  Retention of conformational entropy upon calmodulin binding to target peptides is driven by transient salt bridges.

Authors:  Dayle M A Smith; T P Straatsma; Thomas C Squier
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.