Literature DB >> 21737338

Automated macular pathology diagnosis in retinal OCT images using multi-scale spatial pyramid and local binary patterns in texture and shape encoding.

Yu-Ying Liu1, Mei Chen, Hiroshi Ishikawa, Gadi Wollstein, Joel S Schuman, James M Rehg.   

Abstract

We address a novel problem domain in the analysis of optical coherence tomography (OCT) images: the diagnosis of multiple macular pathologies in retinal OCT images. The goal is to identify the presence of normal macula and each of three types of macular pathologies, namely, macular edema, macular hole, and age-related macular degeneration, in the OCT slice centered at the fovea. We use a machine learning approach based on global image descriptors formed from a multi-scale spatial pyramid. Our local features are dimension-reduced local binary pattern histograms, which are capable of encoding texture and shape information in retinal OCT images and their edge maps, respectively. Our representation operates at multiple spatial scales and granularities, leading to robust performance. We use 2-class support vector machine classifiers to identify the presence of normal macula and each of the three pathologies. To further discriminate sub-types within a pathology, we also build a classifier to differentiate full-thickness holes from pseudo-holes within the macular hole category. We conduct extensive experiments on a large dataset of 326 OCT scans from 136 subjects. The results show that the proposed method is very effective (all AUC>0.93).
Copyright © 2011 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Year:  2011        PMID: 21737338      PMCID: PMC3164533          DOI: 10.1016/j.media.2011.06.005

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  18 in total

1.  Face description with local binary patterns: application to face recognition.

Authors:  Timo Ahonen; Abdenour Hadid; Matti Pietikäinen
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-12       Impact factor: 6.226

2.  Automated macular pathology diagnosis in retinal OCT images using multi-scale spatial pyramid with local binary patterns.

Authors:  Yu-Ying Liu; Mei Chen; Hiroshi Ishikawa; Gadi Wollstein; Joel S Schuman; James M Rehg
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

3.  3D OCT eye movement correction based on particle filtering.

Authors:  Juan Xu; Hiroshi Ishikawa; Gadi Wollstein; Joel S Schuman
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

4.  False positive reduction in mammographic mass detection using local binary patterns.

Authors:  Arnau Oliver; Xavier Lladó; Jordi Freixenet; Joan Martí
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

Review 5.  Macular holes. Pathogenesis, natural history and surgical outcomes.

Authors:  A Luckie; W Heriot
Journal:  Aust N Z J Ophthalmol       Date:  1995-05

6.  A computational approach to edge detection.

Authors:  J Canny
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1986-06       Impact factor: 6.226

7.  Macular segmentation with optical coherence tomography.

Authors:  Hiroshi Ishikawa; Daniel M Stein; Gadi Wollstein; Siobahn Beaton; James G Fujimoto; Joel S Schuman
Journal:  Invest Ophthalmol Vis Sci       Date:  2005-06       Impact factor: 4.799

8.  Three-dimensional optical coherence tomography (3D-OCT) image enhancement with segmentation-free contour modeling C-mode.

Authors:  Hiroshi Ishikawa; Jongsick Kim; Thomas R Friberg; Gadi Wollstein; Larry Kagemann; Michelle L Gabriele; Kelly A Townsend; Kyung R Sung; Jay S Duker; James G Fujimoto; Joel S Schuman
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-10-24       Impact factor: 4.799

9.  The prevalence of diabetic retinopathy among adults in the United States.

Authors:  John H Kempen; Benita J O'Colmain; M Cristina Leske; Steven M Haffner; Ronald Klein; Scot E Moss; Hugh R Taylor; Richard F Hamman
Journal:  Arch Ophthalmol       Date:  2004-04

10.  Segmentation of the optic disc in 3-D OCT scans of the optic nerve head.

Authors:  Kyungmoo Lee; Meindert Niemeijer; Mona K Garvin; Young H Kwon; Milan Sonka; Michael D Abramoff
Journal:  IEEE Trans Med Imaging       Date:  2009-09-15       Impact factor: 10.048

View more
  19 in total

1.  Machine learning based detection of age-related macular degeneration (AMD) and diabetic macular edema (DME) from optical coherence tomography (OCT) images.

Authors:  Yu Wang; Yaonan Zhang; Zhaomin Yao; Ruixue Zhao; Fengfeng Zhou
Journal:  Biomed Opt Express       Date:  2016-11-03       Impact factor: 3.732

2.  Automated foveola localization in retinal 3D-OCT images using structural support vector machine prediction.

Authors:  Yu-Ying Liu; Hiroshi Ishikawa; Mei Chen; Gadi Wollstein; Joel S Schuman; James M Rehg
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

3.  An automated detection of glaucoma using histogram features.

Authors:  Karthikeyan Sakthivel; Rengarajan Narayanan
Journal:  Int J Ophthalmol       Date:  2015-02-18       Impact factor: 1.779

Review 4.  Optical coherence tomography: future trends for imaging in glaucoma.

Authors:  Lindsey S Folio; Gadi Wollstein; Joel S Schuman
Journal:  Optom Vis Sci       Date:  2012-05       Impact factor: 1.973

5.  Self-supervised patient-specific features learning for OCT image classification.

Authors:  Leyuan Fang; Jiahuan Guo; Xingxin He; Muxing Li
Journal:  Med Biol Eng Comput       Date:  2022-08-05       Impact factor: 3.079

6.  Computerized Texture Analysis of Optical Coherence Tomography Angiography of Choriocapillaris in Normal Eyes of Young and Healthy Subjects.

Authors:  Asadolah Movahedan; Phillip Vargas; John Moir; Gabriel Kaufmann; Lindsay Chun; Claire Smith; Nathalie Massamba; Patrick La Riviere; Dimitra Skondra
Journal:  Cells       Date:  2022-06-15       Impact factor: 7.666

7.  Convolutional Mixture of Experts Model: A Comparative Study on Automatic Macular Diagnosis in Retinal Optical Coherence Tomography Imaging.

Authors:  Reza Rasti; Alireza Mehridehnavi; Hossein Rabbani; Fedra Hajizadeh
Journal:  J Med Signals Sens       Date:  2019 Jan-Mar

8.  Deep learning is effective for the classification of OCT images of normal versus Age-related Macular Degeneration.

Authors:  Cecilia S Lee; Doug M Baughman; Aaron Y Lee
Journal:  Ophthalmol Retina       Date:  2017-02-13

9.  Automatic segmentation of closed-contour features in ophthalmic images using graph theory and dynamic programming.

Authors:  Stephanie J Chiu; Cynthia A Toth; Catherine Bowes Rickman; Joseph A Izatt; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2012-04-26       Impact factor: 3.732

10.  Automatic analysis of selected choroidal diseases in OCT images of the eye fundus.

Authors:  Robert Koprowski; Slawomir Teper; Zygmunt Wróbel; Edward Wylegala
Journal:  Biomed Eng Online       Date:  2013-11-14       Impact factor: 2.819

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.