| Literature DB >> 35909126 |
Keyvan Pedrood1, Zahra Rezaei1, Kimia Khavaninzadeh2, Bagher Larijani1, Aida Iraji3,4, Samanesadat Hosseini5, Somayeh Mojtabavi6, Mehdi Dianatpour3, Hossein Rastegar7, Mohammad Ali Faramarzi6, Haleh Hamedifar8, Mir Hamed Hajimiri9, Mohammad Mahdavi10.
Abstract
A novel series of diphenylquinoxaline-6-carbohydrazide hybrids 7a-o were rationally designed and synthesized as anti-diabetic agents. All synthesized compounds 7a-o were screened as possible α-glucosidase inhibitors and exhibited good inhibitory activity with IC50 values in the range of 110.6 ± 6.0 to 453.0 ± 4.7 µM in comparison with acarbose as the positive control (750.0 ± 10.5 µM). An exception in this trend came back to a compound 7k with IC50 value > 750 µM. Furthermore, the most potent derivative 7e bearing 3-fluorophenyl moiety was further explored by kinetic studies and showed the competitive type of inhibition. Additionally, the molecular docking of all derivatives was performed to get an insight into the binding mode of these derivatives within the active site of the enzyme. In silico assessments exhibited that 7e was well occupied in the binding pocket of the enzyme through favorable interactions with residues, correlating to the experimental results.Entities:
Keywords: Hydrazone; Molecular docking; Quinoxaline; Type 2 diabetes; α-glucosidase inhibition
Year: 2022 PMID: 35909126 PMCID: PMC9341091 DOI: 10.1186/s13065-022-00848-4
Source DB: PubMed Journal: BMC Chem ISSN: 2661-801X
Fig. 1The rationale for the design of diphenylquinoxaline-6-carbohydrazide hybrids as new α-glucosidase inhibitors
Scheme 1Outline for the synthesis of diphenylquinoxaline-2-carbohydrazide hybrids 7a–o, reagents and conditions: a AcOH, 50 °C, 4–8 h; b dry EtOH, H2SO4, reflux, 12 h; c EtOH, room temperature, 16 h; d PTSA, EtOH, room temperature, 1 h
In vitro α-glucosidase inhibitory activities of compounds 7a–o
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| ||
|---|---|---|
| Compounds | R | IC50 (µM) a,b |
| 7a | C6H5 | 154.8 ± 3.0 |
| 7b | 2–NO2–C6H4 | 175.0 ± 5.9 |
| 7c | 3–NO2–C6H4 | 278.6 ± 5.8 |
| 7d | 4–NO2–C6H4 | 239.7 ± 7.5 |
| 7e | 3–F–C6H4 | 110.6 ± 6.0 |
| 7f | 4–Cl–C6H4 | 260.3 ± 4.5 |
| 7g | 4–OMe–C6H4 | 319.7 ± 4.9 |
| 7h | 2–NO2–3–OMe–C6H3 | 305.5 ± 7.2 |
| 7i | 2–Cl–5–NO2–C6H3 | 230.8 ± 5.5 |
| 7j | 3–OMe–4–OH–C6H3 | 358.2 ± 6.1 |
| 7k | 3,4,5–trimethoxy–C6H2 | > 750 |
| 7l | 3–OPh–C6H4 | 453.0 ± 4.7 |
| 7m | 5-Nitrobenzo[d][1,3]dioxole | 353.7 ± 3.5 |
| 7n | Naphthyl | 388.1 ± 6.5 |
| 7o | Thiophene | 145.4 ± 5.0 |
| Acarbose | – | 750.0 ± 10.5 |
aValues are the mean ± SEM. All experiments were performed at least three times
bAccording to the ANOVA test followed by Tukey post hoc, all derivatives exhibited significant differences (p-value < 0.05) compared to other compounds except 7a vs 7o, 7d vs 7i, 7g vs 7h, and 7j vs 7n
Fig. 2Kinetics of α-glucosidase inhibition by sample 7e. a The Lineweaver—Burk plot in the absence and presence of different concentrations of sample 7e; b The secondary plot between Km and various concentrations of sample 7e
Fig. 3Superimpose structure of crystallographic ligand (blue) and docked acarbose (gray) in the active site of the α-glucosidase enzyme
Docking results of synthesized compounds within the binding pocket of the α-glucosidase
| Compounds | Glide score | Type of interaction | Moiety | Residue |
|---|---|---|---|---|
| 7a | − 5.690 | Pi-pi-stacked Pi-pi-stacked Pi-pi-stacked Pi-pi-stacked -bound | Phenyl Phenyl Phenyl Quinoxaline Amide | Trp376 Trp481 Phe649 Phe525 Asp282 |
| 7b | − 5.520 | Salt bridge Pi-pi-stacked Pi-pi-stacked H-bound | Nitro Nitrophenyl Nitrophenyl Amide | Asp282 Trp481 Phe525 Asp282 |
| 7c | − 5.756 | Aromatic H-bound Aromatic H-bound Aromatic H-bound Aromatic H-bound H-bound | Phenyl Phenyl Phenyl Quinoxaline Quinoxaline | Asp404 Asp518 Asp616 Trp481 Asp282 |
| 7d | − 5.175 | Aromatic H-bound Aromatic H-bound Aromatic H-bound Aromatic H-bound H-bound | Phenyl Phenyl Quinoxaline Quinoxaline Quinoxaline | Asp404 Asp616 Trp481 Asp518 Asp282 |
| 7e | − 5.802 | Aromatic H-bound Aromatic H-bound Aromatic H-bound Aromatic H-bound H-bound | Phenyl Phenyl Quinoxaline Quinoxaline Quinoxaline | Asp404 Asp616 Trp481 Phe525 Trp481 |
| 7f | − 5.173 | Aromatic H-bound Aromatic H-bound Aromatic H-bound Pi-cation Aromatic H-bound H-bound | Phenyl Phenyl Phenyl 4-Clphenyl Quinoxaline Amide | Asp518 Asp616 Phe649 Arg600 Asp282 Asp282 |
| 7g | − 3.516 | H-bound Aromatic H-bound | Amide 4-meophenyl | Asp282 Trp516 |
| 7h | − 5.681 | Aromatic H-bound Aromatic H-bound Aromatic H-bound Pi-cation H-bound | Phenyl Nitrophenyl Nitrophenyl Nitrophenyl Amide | Trp618 Asp616 Trp481 Asp616 Asp282 |
| 7i | − 5.360 | Aromatic H-bound Aromatic H-bound Halogen Pi-cation Pi-cation H-bound | Phenyl Phenyl Chlorophenyl Nitrophenyl Nitrophenyl Amide | Trp481 Trp481 Trp481 Asp518 Asp616 Asp282 |
| 7j | − 3.641 | H-bound H-bound | Amide OH | Asp282 Asp404 |
| 7k | − 2.207 | H-bound | Phenyl | Asp616 |
| 7l | − 4.028 | H-bound H-bound | Amide Amide | Asp282 Ala284 |
| 7m | − 4.763 | Pi-cation Pi-pi- stacked Pi-pi- stacked | NO2 Quinoxaline Quinoxaline | Arg281 Phe525 Trp481 |
| 7n | − 3.886 | Pi-cation Pi-pi- stacked Pi-pi- stacked | H-bound Quinoxaline Quinoxaline | Ars282 Phe649 Trp376 |
| 7o | − 5.493 | H-bound H-bound Salt bridge Pi-pi- stacked Pi-pi- stacked Aromatic H-bound | Amide Amide Amide Thiophene Quinoxaline Phenyl | Arg411 Arg411 Arg411 Trp481 Trp481 Asp616 |
| Acarbose | − 6.143 | H-bound Salt bridge H-bound H-bound | OH NH OH OH | Asp616 Asp616 Asp518 Phe525 |
Fig. 43D interaction pattern of compounds 7e (most potent derivative) within the α-glucosidase active site
Fig. 53D interaction pattern of compounds 7k (inactive derivative) within the α-glucosidase active site