| Literature DB >> 35885449 |
Jasjit S Suri1, Mahesh A Maindarkar1,2, Sudip Paul2, Puneet Ahluwalia3, Mrinalini Bhagawati2, Luca Saba4, Gavino Faa4, Sanjay Saxena5, Inder M Singh1, Paramjit S Chadha1, Monika Turk6, Amer Johri7, Narendra N Khanna8, Klaudija Viskovic9, Sofia Mavrogeni10, John R Laird11, Martin Miner12, David W Sobel13, Antonella Balestrieri14, Petros P Sfikakis13, George Tsoulfas15, Athanase D Protogerou16, Durga Prasanna Misra17, Vikas Agarwal17, George D Kitas18,19, Raghu Kolluri20, Jagjit S Teji21, Mustafa Al-Maini22, Surinder K Dhanjil1, Meyypan Sockalingam23, Ajit Saxena8, Aditya Sharma24, Vijay Rathore25, Mostafa Fatemi26, Azra Alizad27, Padukode R Krishnan28, Tomaz Omerzu6, Subbaram Naidu29, Andrew Nicolaides30, Kosmas I Paraskevas31, Mannudeep Kalra32, Zoltán Ruzsa33, Mostafa M Fouda34.
Abstract
Background and Motivation: Parkinson's disease (PD) is one of the most serious, non-curable, and expensive to treat. Recently, machine learning (ML) has shown to be able to predict cardiovascular/stroke risk in PD patients. The presence of COVID-19 causes the ML systems to become severely non-linear and poses challenges in cardiovascular/stroke risk stratification. Further, due to comorbidity, sample size constraints, and poor scientific and clinical validation techniques, there have been no well-explained ML paradigms. Deep neural networks are powerful learning machines that generalize non-linear conditions. This study presents a novel investigation of deep learning (DL) solutions for CVD/stroke risk prediction in PD patients affected by the COVID-19 framework. Method: The PRISMA search strategy was used for the selection of 292 studies closely associated with the effect of PD on CVD risk in the COVID-19 framework. We study the hypothesis that PD in the presence of COVID-19 can cause more harm to the heart and brain than in non-COVID-19 conditions. COVID-19 lung damage severity can be used as a covariate during DL training model designs. We, therefore, propose a DL model for the estimation of, (i) COVID-19 lesions in computed tomography (CT) scans and (ii) combining the covariates of PD, COVID-19 lesions, office and laboratory arterial atherosclerotic image-based biomarkers, and medicine usage for the PD patients for the design of DL point-based models for CVD/stroke risk stratification.Entities:
Keywords: COVID-19; Parkinson’s disease; bias; cardiovascular/stroke risk stratification; deep learning
Year: 2022 PMID: 35885449 PMCID: PMC9324237 DOI: 10.3390/diagnostics12071543
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
Figure 1PRISMA model for selection of the studies, dealing with the effect of COVID-19 on PD for CVD and stroke risk stratification. (I: Included, E: Excluded).
Figure 2(a) Studies related to PD with or without COVID-19. (b) Studies related to PD leading to stroke and CVD with or without COVID-19.
Figure 3Stages of acute respiratory distress syndrome formation [69].
Figure 4The inception of the left and right carotid arteries [69].
Figure 5Effect of loss of dopamine in PD with or without COVID-19 (Courtesy of AtheroPoint, Roseville, CA, USA).
Figure 6A risk factor in PD with COVID-19 patients responsible for myocardial infarction (Courtesy of AtheroPoint, Roseville, CA, USA).
Parkinson’s disease without COVID-19 leads to CVD.
| SN | Citations | PS | ME | Relation * | Outcome | Treatment |
|---|---|---|---|---|---|---|
| 1 | Huang et al. [ | 156 | LBBM | Plasma cholesterol risk in PD | Total high cholesterol levels have been linked to a lower risk of developing Parkinson’s disease, but statin use has been linked to an increased risk. | Statins |
| 2 | Yan et al. [ | 68 | LBBM | Carotid plaque in PD | As Parkinson’s disease advances, the thickness of carotid plaques rises. | NR |
| 3 | Potashkin et al. [ | 47 | LBBM | CVD and PD | Both CV and PD share inflammation, insulin resistance, lipid metabolism, and oxidative stress. Moderate coffee consumption and physical activity reduce the risk of heart disease and PD. | NR |
| 4 | Park et al. [ | NR | Population-based cohort study | PD with risk of CVD | CVD is linked to PD. Patients with PD should be monitored for CVD. | NR |
| 5 | Değirmenci et al. [ | NR | LBBM | Cardiac effect in PD | Cardiac problems are prevalent among Parkinson’s disease sufferers. | Levodopa, MOBI, COMT, anticholinergic drugs, deep brain simulations |
| 6 | Scorza et al. [ | NR | LBBM | Cardiac abnormalities in PD | Cardiomyopathy, coronary heart disease, arrhythmias, conduction anomalies, and sudden cardiac arrest are among the symptoms of PD/PS. | NR |
| 7 | Günaydın et al. [ | 65 | LBBM | CVD risk in PD under levodopa treatment | PD patients with L-dopa exhibited increased aortic stiffness and impaired diastolic performance. Homocysteine levels may influence diseases. | NR |
| 8 | Fanciulli et al. [ | NR | LBBM | Orthostatic hypertension in PD | Orthostatic hypotension causes tachycardia, uncommon falls, disorientation, mental impairment, vision issues, fatigue, and painful shoulders, neck, or low back. They appear when the patient stands up and leave when the patient lies down. | Droxidopa, fludrocortisone, clonidine, transdermal nitroglycerin, nifedipine |
| 9 | Cuenca-Bermejo et al. [ | NR | LBBM | Cardiac changes in PD | Cardiac anomalies have been observed in PD individuals who do not have sufficient sympathetic innervation in the heart. Hypotension after a meal is followed by supine hypertension; rising blood pressure variability, decreased heart rate and blood pressure, and chronotropic incompetence is all indications. | NR |
| 10 | Vikdahl et al. [ | 147 | LBBM | CVD risk in PD | Exercise may be beneficial in lowering the risk of cardiovascular disease in some people. High levels of blood cholesterol, tobacco smoking, and a high BMI have all been associated with the progression of PD. | NR |
* SN: serial number, PS: patient size, ME: method of evaluation, Relation: effect of PD on stroke, NR: not reported, SSR: sympathetic skin response, HRV: heart rate variability, OH: orthostatic hypotension, LB: lab-based, MOBI: monoamine oxidase B inhibitors, COMT: catechol-O-methyl transferase inhibitors.
Parkinson’s disease leading to stroke without COVID-19.
| SN | Citations | PS | ME | Relation * | Outcome | TRE |
|---|---|---|---|---|---|---|
| 1 | Li et al. [ | 63 | LBBM | Stroke and CAD in PD | When it comes to reducing the risk for heart disease, exercise may be useful in some cases. It has been discovered that having high amounts of blood cholesterol, smoking cigarettes, and having a high BMI are all connected with the development of PD. | NR |
| 2 | Studer et al. [ | 73 | LBBM | Heart-rate variability and skin resonance in PD | Both SSR and HRV tests are effective in detecting ANS failure in PD patients, not only in the later stages but also in the early stages. Patients with PD may benefit from utilizing these tests to rule out autonomic dysfunction. | NR |
| 3 | Liu et al. [ | 32 | Self-reporting | Stroke in PD | Since cerebrovascular and neurodegenerative diseases coexist, cerebral infarction is linked to PD. However, even though levodopa raises homocysteine levels, it is the most effective and required symptomatic treatment for many PD patients. | NR |
| 4 | Becker et al. [ | NR | LBBM | Risk of stroke in PD | Homocysteine levels that are too high in people who have PD may make them more likely to have a stroke. There has been a link between high levels of homocysteine and a higher likelihood of stroke and heart disease. Vascular disease and dementia, as well as a rise in homocysteine levels in the blood after taking levodopa, are some of the side effects. | NR |
| 5 | Levine et al. [ | NR | LBBM | Traumatic brain injury in PD | Patients with neurological problems can benefit from exercise training by feeling less physically and mentally worn out all the time. People with PD who engage in cardiovascular activity report less fatigue as a result of their efforts. | NR |
| 6 | Rickards [ | NR | NR | Stroke in PD | Patients with chronic neurological illnesses are more likely than the general population to experience debilitating depressive symptoms. It is unclear what causes them, but they may be multifactorial in some cases. | NR |
| 7 | Mastaglia et al. [ | 100 | Self-reporting | Prevalence of stroke in PD | Findings were not directly compared with those of prior investigations of stroke-related mortality and morbidity in the PD group following postmortem examination. | NR |
* SN: serial number, PS: patient size, ME: method of evaluation, Relation: effect of PD on stroke, NR: not reported, SSR: sympathetic skin response, HRV: heart rate variability, OH: orthostatic hypotension, LB: lab-based.
Figure 7Motor and non-motor symptoms in PD patients with or without COVID-19 (Courtesy of AtheroPoint™, Roseville, CA, USA permission granted).
Figure 8The symptoms of COVID-19 in PD patients.
Figure 9(a) The symptoms in patients with joint PD and COVID-19. (b) Risk Factors of PD and COVID-19 with comorbidities.
Studies showing the effect of COVID-19 on PD.
| SN | Author | Year | Demographics | Age | Sex | Type | Data Size | Non-PD | PD | PD w/s COVID | PD Years | Gold Standard |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Antonini et al. [ | 2020 | European | 68 | MF | PD with COVID | 10 | 0 | 10 | 10 | 20 | PD + COVID-19 + Respiratory dysfunctions |
| 2 | Baschi et al. [ | 2020 | European | 60 | MF | PD with COVID | 34 | 0 | 34 | 34 | 6 | PD + COVID-19 + Pneumonia |
| 3 | Brown et al. [ | 2020 | European | 70 | MF | PD with COVID | 102 | 40 | 62 | 51 | 4 | PD + COVID-19 + Respiratory dysfunctions |
| 4 | Cella et al. [ | 2020 | European | 65 | MF | PD with COVID | 141 | 0 | 12 | 12 | 4 | PD + COVID-19 + Respiratory dysfunctions |
| 5 | Starmbi et al. [ | 2021 | European | 65 | MF | PD with COVID | 105 | 0 | 32 | 32 | 4 | PD + COVID-19 + Pneumonia |
| 6 | Helmich et al. [ | 2020 | European | NR | NR | PD with Coved | NR | NR | NR | NR | NR | PD + COVID-19 + Respiratory dysfunctions |
| 7 | Khoshnood et al. [ | 2021 | European | NR | NR | PD with COVID | NR | NR | NR | NR | NR | PD + COVID-19 + Pneumonia |
| 8 | Lau et al. [ | 2021 | European | NR | NR | PD with COVID | NR | NR | NR | NR | 12 | PD + COVID-19 + Respiratory dysfunctions |
| 9 | Sulzer et al. [ | 2021 | NR | NR | NR | PD with COVID | NR | NR | NR | NR | NR | PD + COVID-19 + Respiratory dysfunctions |
| 10 | Tsivgoulis et al. [ | 2021 | NR | NR | NR | PD with COVID | NR | NR | NR | NR | 6 | PD + COVID-19 + Pneumonia |
| 11 | Sorbera et al. [ | 2021 | European | 65 | MF | PD with COVID | 18 | 5 | 13 | 9 | 3 | PD + COVID-19 + Pneumonia |
Figure 10Effect of comorbidities on PD with or without COVID-19 [162].
Figure 11COVID-19 virus pathways leading to stroke and CVD in PD patients (Courtesy of AtheroPoint, Roseville, CA, USA).
Figure 12Manual lesion delineation overlays (red) from tracer 1 on raw CT lung images (Courtesy of AtheroPoint™, Roseville, CA, USA permission granted).
Figure 13Manual lesion delineation overlays (red) from tracer 2 on raw CT lung images (Courtesy of AtheroPoint™, Roseville, CA, USA permission granted).
Pretrained models for COVID-19.
| SN | Authors and Citations | Total CT Scan Samples | Pretrained Model | Accuracy (%) | |
|---|---|---|---|---|---|
| Positive COVID-19 | Negative COVID-19 | ||||
| 1 | Halder et al. [ | 1252 | 1229 | DenseNet 201 | 97.00 |
| ResNet50 V2 | 96.00 | ||||
| Mobile Net | 95.00 | ||||
| VGG-16 | 94.00 | ||||
| 2 | Kumari et al. [ | 987 | 921 | VGG-16 | 87.68 |
| 3-layer CNN | 56.16 | ||||
| 3 | Mishra et al. [ | 360 | 397 | Deep CNN | 86.00 |
| 4 | Saood et al. [ | 287 | 314 | SegNet | 95.00 |
| Unet | 92.00 | ||||
Figure 14Deep learning model to predict the severity of CVD/stroke in PD with COVID-19 framework (Courtesy of AtheroPoint™, Roseville, CA, USA).
AI techniques and their performance for PD detection without COVID-19.
| Attributes (Left to Right) | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 |
|---|---|---|---|---|---|---|---|---|---|
| Citations | IP | AI | CLS | ACC | SEN | SPEC | AUC | MCC | F1 |
| Hoq et al. [ | Voice | HDL | SVM | 94.0 | NR | NR | NR | 0.71 | 0.91 |
| Kamble et al. [ | HW | ML | SVM | 96.0 | NR | NR | 0.87 | NR | 0.8 |
| Alzubaidi et al. [ | Tremor | HDL | DT | 87.9 | NR | NR | NR | 89.34 | 1.17 |
| Khedr et al. [ | Voice | ML | SVM | 95.8 | 90.24 | 92.3 | NR | 92.03 | 96 |
| Mei et al. [ | Voice | ML | KNN | 83.07 | NR | NR | 0.91 | NR | NR |
| Singamaneni et al. [ | Voice | ML | SVM | 94.86 | NR | NR | NR | NR | NR |
| Jayachandran et al. [ | Voice | ML | NB | 78.34 | NR | NR | NR | NR | NR |
| Anitha et al. [ | Voice | ML | SVM | 90.21 | 1.8 | 4.39 | 2.49 | NR | 1.17 |
| Maitín et al. [ | EEG | ML | LR | 62.99 | 0.9067 | 0.981 | NR | NR | NR |
| Poorjam et al. [ | Voice | HDL | SVM | 96.00 | NR | NR | NR | NR | NR |
| Aseer et al. [ | HW | SDL | SVM | 98.28 | NR | NR | NR | NR | NR |
| Naghsh et al. [ | EEG | SDL | DT | 97.38 | NR | NR | NR | NR | NR |
| Wang et al. [ | BM | HDL | KNN | 96.12 | NR | NR | NR | NR | NR |
AUC: Accuracy, SEN: Sensitivity, IP: Input parameter, AI: Artificial intelligence model, CLS: Classifier, SPEC: Specificity, MCC: Matthew’s correlation coefficient, NPV: Net present value, F1: Dice similarity coefficient; HW: Handwriting; BM: Biomarker, NR: Not reported, HW: Handwriting, SDL: Solo deep learning, HDL: Hybrid deep learning, DL: Deep learning, EEG: Electroencephalogram.
Figure 15The general structure of LSTM architecture [242].
Comparative analysis of AI-based studies with CVD/stroke risk stratification of PD patients in the COVID-19 framework.
| SN | Citations | Year | Input Covariates | GT | PS | AI | FE | CLS | ACC % | AUC | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OBBM | LBBM | CUSIP | MedUSE | PD | COV | ||||||||||
| 1 | Yan et. al. [ | 2019 | ✓ | ✓ | ✕ | ✓ | ✕ | ✕ | CVD | NA | NA | NA | NA | NA | NA |
| 2 | Park et al. [ | 2017 | ✓ | ✓ | ✕ | ✕ | ✓ | ✕ | Stroke | 18 | ML | RF | SVM | 88.00 | NR |
| 3 | Suri et al. [ | 2022 | ✓ | ✓ | ✓ | ✕ | ✓ | ✕ | CVD/stroke | NR | ML | NR | NR | NR | NR |
| 4 | Zimmerman et al. [ | 2020 | ✓ | ✓ | ✕ | ✕ | ✕ | ✓ | CVD | 32 | DL | LDA | CNN | 87.23 | NR |
| 5 | Aljameel et al. [ | 2021 | ✓ | ✓ | ✕ | ✕ | ✕ | ✓ | CVD/stroke | 287 | ML | KNN | SVM | 95.00 | 0/99 |
| 6 | Suri et al. [ | 2020 | ✓ | ✓ | ✓ | ✕ | ✕ | ✓ | CVD/stroke | NR | ML/DL | NR | NR | NR | NR |
| 7 | Handy et al. [ | 2021 | ✓ | ✓ | ✓ | ✕ | ✕ | ✓ | CVD/stroke | NR | ML/DL | LSTM | SVM | 84.00 | NR |
| 8 | Unnikrishnan et al. [ | 2016 | ✓ | ✓ | ✕ | ✕ | ✕ | ✕ | CVD | 3654 | ML | LR | SVM | 83.00 | NR |
| 9 | Mouridsen et al. [ | 2020 | ✓ | ✓ | ✕ | ✕ | ✕ | ✕ | Stroke, MRI | 16 | DL | NR | KNN | 74.00 | 0.74 |
| 10 | Bergamaschi et al. [ | 2021 | ✓ | ✓ | ✕ | ✕ | ✕ | ✕ | CVD | 237 | NA | NA | NA | NA | NA |
| 11 | Reva et al. [ | 2021 | ✓ | ✓ | ✕ | ✕ | ✕ | ✕ | Stroke, CT | 200 | ML | NB | DT, RF, SVM | 85.32 | NR |
| 12 | Kakadiaris et al. [ | 2022 | ✓ | ✓ | ✕ | ✕ | ✕ | ✕ | CVD | 6459 | ML | DT, RF | SVM | 86.00 | 0.92 |
| 13 | Proposed study | 2022 | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | CVD/stroke | NA | NA | NA | NA | NA | NA |
IC: Input covariate, COV: COVID-19, PD: Parkinson’s disease, CVD: Cardiovascular disease, AI: Artificial Intelligence, OBBM: Office-based, LBBM: Laboratory-based, CUSIP: Carotid ultrasound image phenotype, MedUse: Medication, GT: Ground truth, PS: Patient size, FE: Feature extraction, CLS: Type of classifier, ACC: Accuracy, AUC: Area under the curve, NA: Not applicable, NR: Not reported, ✓: Yes, ✕: No.
Figure 16(a) Carotid artery disease is being investigated as a potential surrogate marker for coronary artery disease. (b) Imaging device where the carotid artery is being scanned with the linear ultrasound probe. The middle panel shows the B-mode carotid longitudinal US scan and IVUS-based artery cross-sectional scan [250].
Benchmarking scheme for selected studies.
| SN | S0 | COVID-19 Symptoms in PD Patients | PD Motor Symptoms | PD Non-Motor Symptoms |
| Gold Standard | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| S1 | S2 | S3 | S4 | S5 | S6 | S7 | S8 | S9 | S10 | S11 | S12 | S13 | S14 | S15 | S16 | ||
| 1 | Antonini et al. [ | ✓ | ✕ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | PD + COVID-19 + Pneumonia |
| 2 | Baschi et al. [ | ✓ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | PD + COVID-19 + Respiratory dysfunctions |
| 3 | Brown et al. [ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | PD + COVID-19 + Pneumonia |
| 4 | Cella et al. [ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | ✓ | PD + COVID-19 + Respiratory dysfunctions |
| 5 | Starmbi et al. [ | ✓ | ✕ | ✓ | ✕ | ✓ | ✕ | ✓ | ✕ | ✓ | ✕ | ✓ | ✕ | ✓ | ✓ | ✓ | PD + COVID-19 + Respiratory dysfunctions |
| 6 | Helmich et al. [ | ✕ | ✕ | ✓ | ✕ | ✓ | ✕ | ✓ | ✕ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✕ | PD + COVID-19 + Pneumonia |
| 7 | Khoshnood et al. [ | ✕ | ✕ | ✓ | ✕ | ✕ | ✕ | ✓ | ✓ | ✓ | ✕ | ✓ | ✕ | ✓ | ✓ | ✓ | PD + COVID-19 + Respiratory dysfunctions |
| 8 | Lau et al. [ | ✓ | ✕ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✕ | ✓ | PD + COVID-19 + Pneumonia |
| 9 | Sulzer et al. [ | ✓ | ✓ | ✓ | ✕ | ✕ | ✓ | ✕ | ✓ | ✕ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | PD + COVID-19 + Respiratory dysfunctions |
| 10 | Tsivgoulis et al. [ | ✓ | ✓ | ✓ | ✓ | ✓ | ✕ | ✕ | ✕ | ✕ | ✓ | ✕ | ✕ | ✕ | ✓ | ✓ | PD + COVID-19 + Respiratory dysfunctions |
| 11 | Sorbera et al. [ | ✓ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | ✓ | ✓ | ✕ | ✓ | ✓ | ✓ | PD + COVID-19 + Pneumonia |
S0: Author, S1: Fever, S2: Dry cough, S3: Cough, S4: Shortness of breath, S5: Pneumonia, S6: Delirium, S7: Bradykinesia, S8: Rigidity in throat muscles, S9: Anxiety, S10: Sleep disorder, S11: Hypertension, S12: Fainting, S13: Age, S14: PD duration, S15: PD with COVID-19 and comorbidities, S16: PD with COVID-19 mortality risk factor, ✓: Yes, ✕: No.