| Literature DB >> 30255236 |
Mainak Biswas1, Venkatanareshbabu Kuppili1, Luca Saba2, Damodar Reddy Edla1, Harman S Suri3,4, Aditya Sharma5, Elisa Cuadrado-Godia6, John R Laird7, Andrew Nicolaides8,9, Jasjit S Suri10.
Abstract
Manual ultrasound (US)-based methods are adapted for lumen diameter (LD) measurement to estimate the risk of stroke but they are tedious, error prone, and subjective causing variability. We propose an automated deep learning (DL)-based system for lumen detection. The system consists of a combination of two DL systems: encoder and decoder for lumen segmentation. The encoder employs a 13-layer convolution neural network model (CNN) for rich feature extraction. The decoder employs three up-sample layers of fully convolution network (FCN) for lumen segmentation. Three sets of manual tracings were used during the training paradigm leading to the design of three DL systems. Cross-validation protocol was implemented for all three DL systems. Using the polyline distance metric, the precision of merit for three DL systems over 407 US scans was 99.61%, 97.75%, and 99.89%, respectively. The Jaccard index and Dice similarity of DL lumen segmented region against three ground truth (GT) regions were 0.94, 0.94, and 0.93 and 0.97, 0.97, and 0.97, respectively. The corresponding AUC for three DL systems was 0.95, 0.91, and 0.93. The experimental results demonstrated superior performance of proposed deep learning system over conventional methods in literature. Graphical abstract ᅟ.Entities:
Keywords: CNN; Carotid; Deep learning; Lumen diameter; Performance; Stroke; Ultrasound
Mesh:
Year: 2018 PMID: 30255236 DOI: 10.1007/s11517-018-1897-x
Source DB: PubMed Journal: Med Biol Eng Comput ISSN: 0140-0118 Impact factor: 2.602