Literature DB >> 35881349

CRISPR/Cas9 Editing of the Plasmodium falciparum Genome.

Sophie Adjalley1,2, Marcus Chee San Lee3.   

Abstract

The ability to interrogate gene function in Plasmodium parasites has been greatly enhanced by the advent of CRISPR/Cas9 systems. The breadth of genome manipulations ranges from single point mutations to large multigene deletions, however many of the technical considerations for designing CRISPR-based experiments are common to any editing approach. This review will discuss protocols for vector construction and donor design for genome editing P. falciparum, including pitfalls, variables, and validation methods.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  CRISPR; Cas9; DNA repair; Donor template; Malaria; P. falciparum genome editing

Mesh:

Year:  2022        PMID: 35881349     DOI: 10.1007/978-1-0716-2189-9_17

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  19 in total

1.  Flexible guide-RNA design for CRISPR applications using Protospacer Workbench.

Authors:  Cameron Ross MacPherson; Artur Scherf
Journal:  Nat Biotechnol       Date:  2015-06-29       Impact factor: 54.908

2.  Regioisomerization of Antimalarial Drug WR99210 Explains the Inactivity of a Commercial Stock.

Authors:  T Parks Remcho; Sravanthi D Guggilapu; Phillip Cruz; Glenn A Nardone; Gavin Heffernan; Robert D O'Connor; Carole A Bewley; Thomas E Wellems; Kristin D Lane
Journal:  Antimicrob Agents Chemother       Date:  2020-12-16       Impact factor: 5.191

3.  A genetic system to study Plasmodium falciparum protein function.

Authors:  Jakob Birnbaum; Sven Flemming; Nick Reichard; Alexandra Blancke Soares; Paolo Mesén-Ramírez; Ernst Jonscher; Bärbel Bergmann; Tobias Spielmann
Journal:  Nat Methods       Date:  2017-03-13       Impact factor: 28.547

Review 4.  DNA repair mechanisms and their biological roles in the malaria parasite Plasmodium falciparum.

Authors:  Andrew H Lee; Lorraine S Symington; David A Fidock
Journal:  Microbiol Mol Biol Rev       Date:  2014-09       Impact factor: 11.056

5.  Genome editing in the human malaria parasite Plasmodium falciparum using the CRISPR-Cas9 system.

Authors:  Mehdi Ghorbal; Molly Gorman; Cameron Ross Macpherson; Rafael Miyazawa Martins; Artur Scherf; Jose-Juan Lopez-Rubio
Journal:  Nat Biotechnol       Date:  2014-06-01       Impact factor: 54.908

6.  UDP-galactose and acetyl-CoA transporters as Plasmodium multidrug resistance genes.

Authors:  Michelle Yi-Xiu Lim; Gregory LaMonte; Marcus C S Lee; Christin Reimer; Bee Huat Tan; Victoria Corey; Bianca F Tjahjadi; Adeline Chua; Marie Nachon; René Wintjens; Peter Gedeck; Benoit Malleret; Laurent Renia; Ghislain M C Bonamy; Paul Chi-Lui Ho; Bryan K S Yeung; Eric D Chow; Liting Lim; David A Fidock; Thierry T Diagana; Elizabeth A Winzeler; Pablo Bifani
Journal:  Nat Microbiol       Date:  2016-09-19       Impact factor: 17.745

Review 7.  Cutting back malaria: CRISPR/Cas9 genome editing of Plasmodium.

Authors:  Marcus C S Lee; Scott E Lindner; Jose-Juan Lopez-Rubio; Manuel Llinás
Journal:  Brief Funct Genomics       Date:  2019-09-24       Impact factor: 4.241

Review 8.  CRISPR-Cas guides the future of genetic engineering.

Authors:  Gavin J Knott; Jennifer A Doudna
Journal:  Science       Date:  2018-08-31       Impact factor: 47.728

9.  Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system.

Authors:  Baohui Chen; Luke A Gilbert; Beth A Cimini; Joerg Schnitzbauer; Wei Zhang; Gene-Wei Li; Jason Park; Elizabeth H Blackburn; Jonathan S Weissman; Lei S Qi; Bo Huang
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

10.  Efficient CRISPR-Cas9-mediated genome editing in Plasmodium falciparum.

Authors:  Jeffrey C Wagner; Randall J Platt; Stephen J Goldfless; Feng Zhang; Jacquin C Niles
Journal:  Nat Methods       Date:  2014-08-10       Impact factor: 28.547

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  1 in total

1.  Efficient generation of mNeonGreen Plasmodium falciparum reporter lines enables quantitative fitness analysis.

Authors:  Johanna Hoshizaki; Hannah Jagoe; Marcus C S Lee
Journal:  Front Cell Infect Microbiol       Date:  2022-09-16       Impact factor: 6.073

  1 in total

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