| Literature DB >> 35855357 |
Mehmet Akkurt1, Sema Öztürk Yıldırım2,1, Namiq Q Shikhaliyev3, Naila A Mammadova3, Ayten A Niyazova3,4, Victor N Khrustalev5,6, Ajaya Bhattarai7.
Abstract
The mol-ecule of the title compound, C14H8Br3N3O2, consists of three almost planar groups: the central di-bromo-ethenyldiazene fragment and two attached aromatic rings. The mean planes of these rings form dihedral angles with the plane of the central fragment of 26.35 (15) and 72.57 (14)° for bromine- and nitro-substituted rings, respectively. In the crystal, C-H⋯Br inter-actions connect mol-ecules, generating zigzag C(8) chains along the [100] direction. These chains are linked by C-Br⋯π inter-actions into layers parallel to (001). van der Waals inter-actions between the layers aid in the cohesion of the crystal packing. The most substantial contributions to crystal packing, according to a Hirshfeld surface analysis, are from Br⋯H/H⋯Br (20.9%), C⋯H/H⋯C (15.2%), O⋯H/H⋯O (12.6%) and H⋯H (11.7%) contacts. © Akkurt et al. 2022.Entities:
Keywords: C(8) chains; C—H⋯Br interactions; Hirshfeld surface analysis; crystal structure; non-covalent interactions
Year: 2022 PMID: 35855357 PMCID: PMC9260355 DOI: 10.1107/S205698902200620X
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C10—H10⋯Br1i | 0.95 | 2.89 | 3.530 (4) | 126 |
Symmetry code: (i) .
Figure 2View down the a-axis of the title compound showing the C—H⋯Br interactions.
Figure 3View down the b-axis of the title compound, showing the C—Br⋯π interactions.
Figure 4View down the c axis of the title compound, showing the C—Br⋯π interactions.
Figure 5View of the three-dimensional Hirshfeld surface of the title compound plotted over d norm in the range −0.1401 to 1.1158 a.u.
Figure 6The full two-dimensional fingerprint plots for the title compound, showing all interactions (a) and delineated into (b) Br⋯H/H⋯Br, (c) C⋯H/H⋯C, (d) O⋯H/H⋯O, and (e) H⋯H interactions. The d i and d e values are the closest internal and external distances (in Å) from given points on the Hirshfeld surface.
Summary of short interatomic contacts (Å) in the title compound
| Br1⋯H10 | 2.89 |
|
|---|---|---|
| H14⋯H5 | 2.40 |
|
| Br2⋯Br3 | 3.44 |
|
| H10⋯C13 | 3.02 | − |
| O1⋯H13 | 2.75 |
|
| H7⋯N2 | 2.65 |
|
Experimental details
| Crystal data | |
| Chemical formula | C14H8Br3N3O2 |
|
| 489.96 |
| Crystal system, space group | Orthorhombic, |
| Temperature (K) | 100 |
|
| 13.8678 (5), 13.5442 (5), 8.3017 (3) |
|
| 1559.29 (10) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 7.77 |
| Crystal size (mm) | 0.31 × 0.14 × 0.08 |
| Data collection | |
| Diffractometer | Bruker D8 QUEST, Photon III detector |
| Absorption correction | Multi-scan ( |
|
| 0.044, 0.110 |
| No. of measured, independent and observed [ | 75835, 7370, 5962 |
|
| 0.057 |
| (sin θ/λ)max (Å−1) | 0.826 |
| Refinement | |
|
| 0.033, 0.085, 1.02 |
| No. of reflections | 7370 |
| No. of parameters | 199 |
| No. of restraints | 1 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 1.41, −0.97 |
| Absolute structure | Flack parameter determined using 2437 quotients [( |
| Absolute structure parameter | 0.003 (5) |
Computer programs: APEX3 and SAINT (Bruker, 2018 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2018 (Sheldrick, 2015b ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2020 ▸).
| C14H8Br3N3O2 | |
| Mo | |
| Orthorhombic, | Cell parameters from 9976 reflections |
| θ = 2.9–34.8° | |
| µ = 7.77 mm−1 | |
| Block, red | |
| 0.31 × 0.14 × 0.08 mm | |
| Bruker D8 QUEST, Photon III detector diffractometer | 7370 independent reflections |
| Radiation source: fine-focus sealed X-Ray tube | 5962 reflections with |
| Graphite monochromator | |
| Detector resolution: 7.31 pixels mm-1 | θmax = 36.0°, θmin = 2.9° |
| φ and ω shutterless scans | |
| Absorption correction: multi-scan (SADABS; Krause | |
| 75835 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.002 | |
| 7370 reflections | Δρmax = 1.41 e Å−3 |
| 199 parameters | Δρmin = −0.97 e Å−3 |
| 1 restraint | Absolute structure: Flack parameter determined using 2437 quotients
[( |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.003 (5) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Br1 | 0.49964 (2) | 0.72932 (3) | 0.49158 (6) | 0.02765 (8) | |
| Br2 | 0.44572 (2) | 0.50470 (2) | 0.51189 (7) | 0.02906 (8) | |
| Br3 | −0.10955 (3) | 0.24165 (3) | 0.55241 (7) | 0.03182 (9) | |
| O1 | 0.1810 (2) | 1.1045 (2) | 0.3729 (4) | 0.0333 (6) | |
| O2 | 0.1662 (3) | 1.1002 (2) | 0.6323 (4) | 0.0326 (6) | |
| N1 | 0.18506 (19) | 1.0613 (2) | 0.5020 (5) | 0.0231 (5) | |
| N2 | 0.24431 (19) | 0.57755 (19) | 0.5188 (4) | 0.0207 (5) | |
| N3 | 0.15599 (19) | 0.5982 (2) | 0.5376 (4) | 0.0228 (6) | |
| C1 | 0.4020 (2) | 0.6350 (2) | 0.5012 (6) | 0.0222 (6) | |
| C2 | 0.3073 (2) | 0.6586 (2) | 0.5080 (5) | 0.0205 (5) | |
| C3 | 0.2727 (2) | 0.7629 (2) | 0.5040 (5) | 0.0196 (5) | |
| C4 | 0.2373 (3) | 0.8055 (3) | 0.6449 (5) | 0.0221 (6) | |
| H4 | 0.233234 | 0.767615 | 0.741062 | 0.027* | |
| C5 | 0.2076 (3) | 0.9043 (3) | 0.6441 (5) | 0.0222 (6) | |
| H5 | 0.184039 | 0.934772 | 0.739348 | 0.027* | |
| C6 | 0.2136 (2) | 0.9563 (2) | 0.5016 (5) | 0.0212 (5) | |
| C7 | 0.2468 (3) | 0.9148 (3) | 0.3596 (5) | 0.0249 (7) | |
| H7 | 0.248972 | 0.952162 | 0.262834 | 0.030* | |
| C8 | 0.2769 (3) | 0.8171 (3) | 0.3629 (5) | 0.0235 (6) | |
| H8 | 0.300598 | 0.787169 | 0.267351 | 0.028* | |
| C9 | 0.0971 (2) | 0.5110 (2) | 0.5422 (5) | 0.0208 (6) | |
| C10 | 0.0066 (3) | 0.5207 (3) | 0.6113 (5) | 0.0251 (7) | |
| H10 | −0.013356 | 0.582330 | 0.654399 | 0.030* | |
| C11 | −0.0553 (3) | 0.4391 (3) | 0.6172 (5) | 0.0262 (7) | |
| H11 | −0.117165 | 0.444374 | 0.665505 | 0.031* | |
| C12 | −0.0249 (3) | 0.3509 (2) | 0.5516 (5) | 0.0243 (6) | |
| C13 | 0.0662 (2) | 0.3397 (2) | 0.4837 (5) | 0.0246 (7) | |
| H13 | 0.085933 | 0.277960 | 0.440465 | 0.030* | |
| C14 | 0.1275 (2) | 0.4203 (2) | 0.4803 (5) | 0.0236 (6) | |
| H14 | 0.190380 | 0.413915 | 0.435972 | 0.028* |
| Br1 | 0.01833 (12) | 0.02119 (13) | 0.0434 (2) | −0.00217 (10) | 0.00069 (14) | 0.00037 (16) |
| Br2 | 0.02025 (12) | 0.01897 (13) | 0.0480 (2) | 0.00223 (10) | −0.00256 (15) | −0.00061 (14) |
| Br3 | 0.02917 (16) | 0.02402 (15) | 0.0423 (2) | −0.00937 (12) | −0.00254 (18) | 0.00189 (17) |
| O1 | 0.0460 (17) | 0.0222 (13) | 0.0317 (15) | 0.0060 (12) | 0.0009 (13) | 0.0062 (11) |
| O2 | 0.0450 (16) | 0.0217 (13) | 0.0310 (16) | 0.0042 (12) | 0.0006 (13) | −0.0038 (11) |
| N1 | 0.0211 (10) | 0.0185 (11) | 0.0296 (15) | 0.0000 (8) | 0.0007 (13) | −0.0001 (12) |
| N2 | 0.0179 (10) | 0.0190 (10) | 0.0251 (15) | −0.0007 (8) | −0.0006 (10) | 0.0012 (11) |
| N3 | 0.0184 (11) | 0.0192 (11) | 0.0306 (17) | −0.0012 (8) | 0.0016 (10) | 0.0014 (11) |
| C1 | 0.0181 (11) | 0.0170 (11) | 0.0315 (16) | 0.0001 (9) | −0.0020 (13) | −0.0003 (13) |
| C2 | 0.0182 (11) | 0.0171 (11) | 0.0263 (15) | 0.0002 (9) | −0.0010 (12) | 0.0015 (12) |
| C3 | 0.0164 (10) | 0.0167 (11) | 0.0257 (15) | −0.0004 (8) | −0.0012 (13) | 0.0022 (12) |
| C4 | 0.0237 (14) | 0.0183 (13) | 0.0243 (16) | 0.0015 (11) | 0.0002 (12) | 0.0010 (12) |
| C5 | 0.0215 (14) | 0.0211 (14) | 0.0241 (16) | 0.0024 (11) | 0.0005 (12) | −0.0010 (12) |
| C6 | 0.0194 (11) | 0.0166 (11) | 0.0275 (15) | 0.0000 (9) | −0.0004 (13) | −0.0007 (13) |
| C7 | 0.0262 (15) | 0.0209 (14) | 0.0276 (18) | 0.0018 (12) | 0.0018 (13) | 0.0031 (12) |
| C8 | 0.0238 (14) | 0.0202 (14) | 0.0265 (17) | 0.0003 (11) | 0.0022 (13) | 0.0003 (12) |
| C9 | 0.0189 (12) | 0.0167 (11) | 0.0269 (17) | −0.0010 (9) | −0.0007 (11) | 0.0000 (12) |
| C10 | 0.0230 (14) | 0.0182 (13) | 0.0342 (19) | 0.0003 (11) | 0.0021 (13) | −0.0015 (13) |
| C11 | 0.0203 (13) | 0.0209 (14) | 0.037 (2) | −0.0021 (11) | 0.0034 (13) | −0.0005 (13) |
| C12 | 0.0238 (13) | 0.0185 (12) | 0.0305 (17) | −0.0061 (10) | −0.0016 (13) | 0.0016 (14) |
| C13 | 0.0246 (13) | 0.0182 (12) | 0.0312 (19) | −0.0007 (10) | 0.0009 (14) | −0.0027 (13) |
| C14 | 0.0205 (12) | 0.0208 (13) | 0.0295 (19) | −0.0005 (10) | 0.0035 (13) | −0.0024 (13) |
| Br1—C1 | 1.864 (3) | C5—H5 | 0.9500 |
| Br2—C1 | 1.868 (3) | C6—C7 | 1.384 (6) |
| Br3—C12 | 1.888 (3) | C7—C8 | 1.388 (5) |
| O1—N1 | 1.223 (5) | C7—H7 | 0.9500 |
| O2—N1 | 1.231 (5) | C8—H8 | 0.9500 |
| N1—C6 | 1.477 (4) | C9—C10 | 1.386 (5) |
| N2—N3 | 1.266 (4) | C9—C14 | 1.397 (5) |
| N2—C2 | 1.406 (4) | C10—C11 | 1.400 (5) |
| N3—C9 | 1.437 (4) | C10—H10 | 0.9500 |
| C1—C2 | 1.352 (4) | C11—C12 | 1.378 (5) |
| C2—C3 | 1.492 (4) | C11—H11 | 0.9500 |
| C3—C8 | 1.384 (5) | C12—C13 | 1.392 (5) |
| C3—C4 | 1.394 (5) | C13—C14 | 1.384 (5) |
| C4—C5 | 1.400 (5) | C13—H13 | 0.9500 |
| C4—H4 | 0.9500 | C14—H14 | 0.9500 |
| C5—C6 | 1.379 (5) | ||
| O1—N1—O2 | 123.8 (3) | C6—C7—H7 | 121.0 |
| O1—N1—C6 | 118.1 (3) | C8—C7—H7 | 121.0 |
| O2—N1—C6 | 118.1 (3) | C3—C8—C7 | 120.7 (3) |
| N3—N2—C2 | 115.9 (3) | C3—C8—H8 | 119.6 |
| N2—N3—C9 | 111.8 (3) | C7—C8—H8 | 119.6 |
| C2—C1—Br1 | 123.1 (2) | C10—C9—C14 | 120.6 (3) |
| C2—C1—Br2 | 122.4 (2) | C10—C9—N3 | 116.6 (3) |
| Br1—C1—Br2 | 114.43 (15) | C14—C9—N3 | 122.8 (3) |
| C1—C2—N2 | 115.0 (3) | C9—C10—C11 | 119.7 (3) |
| C1—C2—C3 | 122.3 (3) | C9—C10—H10 | 120.2 |
| N2—C2—C3 | 122.7 (3) | C11—C10—H10 | 120.2 |
| C8—C3—C4 | 120.3 (3) | C12—C11—C10 | 118.9 (3) |
| C8—C3—C2 | 120.5 (3) | C12—C11—H11 | 120.6 |
| C4—C3—C2 | 119.1 (3) | C10—C11—H11 | 120.6 |
| C3—C4—C5 | 119.7 (3) | C11—C12—C13 | 122.1 (3) |
| C3—C4—H4 | 120.2 | C11—C12—Br3 | 119.2 (3) |
| C5—C4—H4 | 120.2 | C13—C12—Br3 | 118.7 (3) |
| C6—C5—C4 | 118.3 (3) | C14—C13—C12 | 118.7 (3) |
| C6—C5—H5 | 120.8 | C14—C13—H13 | 120.7 |
| C4—C5—H5 | 120.8 | C12—C13—H13 | 120.7 |
| C5—C6—C7 | 122.9 (3) | C13—C14—C9 | 120.0 (3) |
| C5—C6—N1 | 118.3 (3) | C13—C14—H14 | 120.0 |
| C7—C6—N1 | 118.8 (3) | C9—C14—H14 | 120.0 |
| C6—C7—C8 | 118.0 (3) | ||
| C2—N2—N3—C9 | 178.1 (3) | O2—N1—C6—C7 | −171.8 (3) |
| Br1—C1—C2—N2 | −178.4 (3) | C5—C6—C7—C8 | −1.2 (5) |
| Br2—C1—C2—N2 | −1.8 (6) | N1—C6—C7—C8 | 177.5 (3) |
| Br1—C1—C2—C3 | 1.6 (6) | C4—C3—C8—C7 | 0.6 (5) |
| Br2—C1—C2—C3 | 178.2 (3) | C2—C3—C8—C7 | −178.5 (3) |
| N3—N2—C2—C1 | 174.8 (4) | C6—C7—C8—C3 | 0.6 (5) |
| N3—N2—C2—C3 | −5.2 (5) | N2—N3—C9—C10 | 160.3 (4) |
| C1—C2—C3—C8 | 72.2 (5) | N2—N3—C9—C14 | −20.0 (5) |
| N2—C2—C3—C8 | −107.7 (4) | C14—C9—C10—C11 | −0.9 (6) |
| C1—C2—C3—C4 | −106.9 (5) | N3—C9—C10—C11 | 178.9 (4) |
| N2—C2—C3—C4 | 73.1 (5) | C9—C10—C11—C12 | −0.9 (6) |
| C8—C3—C4—C5 | −1.3 (5) | C10—C11—C12—C13 | 1.7 (7) |
| C2—C3—C4—C5 | 177.8 (3) | C10—C11—C12—Br3 | −177.8 (3) |
| C3—C4—C5—C6 | 0.8 (5) | C11—C12—C13—C14 | −0.8 (6) |
| C4—C5—C6—C7 | 0.5 (5) | Br3—C12—C13—C14 | 178.8 (3) |
| C4—C5—C6—N1 | −178.2 (3) | C12—C13—C14—C9 | −1.0 (6) |
| O1—N1—C6—C5 | −172.7 (3) | C10—C9—C14—C13 | 1.8 (6) |
| O2—N1—C6—C5 | 6.9 (4) | N3—C9—C14—C13 | −177.9 (4) |
| O1—N1—C6—C7 | 8.6 (5) |
| H··· | ||||
| C10—H10···Br1i | 0.95 | 2.89 | 3.530 (4) | 126 |