| Literature DB >> 35796980 |
Christopher Schächner1, Philipp E Merkl1,2, Michael Pilsl1, Katrin Schwank1, Kristin Hergert1, Sebastian Kruse1, Philipp Milkereit3, Herbert Tschochner4, Joachim Griesenbeck5.
Abstract
In growing eukaryotic cells, nuclear ribosomal (r)RNA synthesis by RNA polymerase (RNAP) I accounts for the vast majority of cellular transcription. This high output is achieved by the presence of multiple copies of rRNA genes in eukaryotic genomes transcribed at a high rate. In contrast to most of the other transcribed genomic loci, actively transcribed rRNA genes are largely devoid of nucleosomes adapting a characteristic "open" chromatin state, whereas a significant fraction of rRNA genes resides in a transcriptionally inactive nucleosomal "closed" chromatin state. Here, we review our current knowledge about the nature of open rRNA gene chromatin and discuss how this state may be established.Entities:
Keywords: Chromatin; Chromatin endogenous cleavage (ChEC); Chromatin immunoprecipitation (ChIP ); Electron microscopy (EM); High mobility group (HMG) box proteins; Hmo1; Nucleolar organizer region (NOR); Nucleolus; Nucleosome; Preinitiation complex (PIC); Psoralen cross-linking; RNA polymerase I; Ribosomal DNA; Ribosomal RNA genes; Transcription; Upstream binding factor (UBF)
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Year: 2022 PMID: 35796980 DOI: 10.1007/978-1-0716-2501-9_2
Source DB: PubMed Journal: Methods Mol Biol ISSN: 1064-3745