Literature DB >> 23178386

Regulation of fungal secondary metabolism.

Axel A Brakhage1.   

Abstract

Fungi produce a multitude of low-molecular-mass compounds known as secondary metabolites, which have roles in a range of cellular processes such as transcription, development and intercellular communication. In addition, many of these compounds now have important applications, for instance, as antibiotics or immunosuppressants. Genome mining efforts indicate that the capability of fungi to produce secondary metabolites has been substantially underestimated because many of the fungal secondary metabolite biosynthesis gene clusters are silent under standard cultivation conditions. In this Review, I describe our current understanding of the regulatory elements that modulate the transcription of genes involved in secondary metabolism. I also discuss how an improved knowledge of these regulatory elements will ultimately lead to a better understanding of the physiological and ecological functions of these important compounds and will pave the way for a novel avenue to drug discovery through targeted activation of silent gene clusters.

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Year:  2012        PMID: 23178386     DOI: 10.1038/nrmicro2916

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  116 in total

Review 1.  Secondary metabolic gene clusters: evolutionary toolkits for chemical innovation.

Authors:  Anne Osbourn
Journal:  Trends Genet       Date:  2010-08-24       Impact factor: 11.639

2.  Disruption of a nonribosomal peptide synthetase in Aspergillus fumigatus eliminates gliotoxin production.

Authors:  Robert A Cramer; Michael P Gamcsik; Rhea M Brooking; Laura K Najvar; William R Kirkpatrick; Thomas F Patterson; Carl J Balibar; John R Graybill; John R Perfect; Soman N Abraham; William J Steinbach
Journal:  Eukaryot Cell       Date:  2006-06

Review 3.  Bioactive microbial metabolites.

Authors:  János Bérdy
Journal:  J Antibiot (Tokyo)       Date:  2005-01       Impact factor: 2.649

4.  Genomics-driven discovery of PKS-NRPS hybrid metabolites from Aspergillus nidulans.

Authors:  Sebastian Bergmann; Julia Schümann; Kirstin Scherlach; Corinna Lange; Axel A Brakhage; Christian Hertweck
Journal:  Nat Chem Biol       Date:  2007-03-18       Impact factor: 15.040

5.  The fungal CPCR1 protein, which binds specifically to beta-lactam biosynthesis genes, is related to human regulatory factor X transcription factors.

Authors:  E K Schmitt; U Kück
Journal:  J Biol Chem       Date:  2000-03-31       Impact factor: 5.157

6.  CPCR1, but not its interacting transcription factor AcFKH1, controls fungal arthrospore formation in Acremonium chrysogenum.

Authors:  Birgit Hoff; Esther K Schmitt; Ulrich Kück
Journal:  Mol Microbiol       Date:  2005-06       Impact factor: 3.501

Review 7.  HAP-Like CCAAT-binding complexes in filamentous fungi: implications for biotechnology.

Authors:  A A Brakhage; A Andrianopoulos; M Kato; S Steidl; M A Davis; N Tsukagoshi; M J Hynes
Journal:  Fungal Genet Biol       Date:  1999 Jul-Aug       Impact factor: 3.495

8.  Genomic mining for Aspergillus natural products.

Authors:  Jin Woo Bok; Dirk Hoffmeister; Lori A Maggio-Hall; Renato Murillo; Jeremy D Glasner; Nancy P Keller
Journal:  Chem Biol       Date:  2006-01

9.  Modulation of antioxidant defense in Aspergillus parasiticus is involved in aflatoxin biosynthesis: a role for the ApyapA gene.

Authors:  Massimo Reverberi; Slaven Zjalic; Alessandra Ricelli; Federico Punelli; Emanuela Camera; Claudia Fabbri; Mauro Picardo; Corrado Fanelli; Anna A Fabbri
Journal:  Eukaryot Cell       Date:  2008-04-25

10.  Comparative mapping of aflatoxin pathway gene clusters in Aspergillus parasiticus and Aspergillus flavus.

Authors:  J Yu; P K Chang; J W Cary; M Wright; D Bhatnagar; T E Cleveland; G A Payne; J E Linz
Journal:  Appl Environ Microbiol       Date:  1995-06       Impact factor: 4.792

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  274 in total

1.  Two rare quinone-type metabolites from the fungus Septofusidium berolinense and their biological activities.

Authors:  Güner Ekiz; Elif Esin Hameş; Ayşe Nalbantsoy; Erdal Bedir
Journal:  J Antibiot (Tokyo)       Date:  2015-09-02       Impact factor: 2.649

2.  Pgas, a Low-pH-Induced Promoter, as a Tool for Dynamic Control of Gene Expression for Metabolic Engineering of Aspergillus niger.

Authors:  Xian Yin; Hyun-Dong Shin; Jianghua Li; Guocheng Du; Long Liu; Jian Chen
Journal:  Appl Environ Microbiol       Date:  2017-03-02       Impact factor: 4.792

Review 3.  Advances in linking polyketides and non-ribosomal peptides to their biosynthetic gene clusters in Fusarium.

Authors:  Mikkel Rank Nielsen; Teis Esben Sondergaard; Henriette Giese; Jens Laurids Sørensen
Journal:  Curr Genet       Date:  2019-05-28       Impact factor: 3.886

4.  Control of Development, Secondary Metabolism and Light-Dependent Carotenoid Biosynthesis by the Velvet Complex of Neurospora crassa.

Authors:  Özlem Sarikaya Bayram; Anne Dettmann; Betim Karahoda; Nicola M Moloney; Tereza Ormsby; Jamie McGowan; Sara Cea-Sánchez; Alejandro Miralles-Durán; Guilherme T P Brancini; Eva M Luque; David A Fitzpatrick; David Cánovas; Luis M Corrochano; Sean Doyle; Eric U Selker; Stephan Seiler; Özgür Bayram
Journal:  Genetics       Date:  2019-05-08       Impact factor: 4.562

Review 5.  Strategies for mining fungal natural products.

Authors:  Philipp Wiemann; Nancy P Keller
Journal:  J Ind Microbiol Biotechnol       Date:  2013-10-22       Impact factor: 3.346

6.  Prototype of an intertwined secondary-metabolite supercluster.

Authors:  Philipp Wiemann; Chun-Jun Guo; Jonathan M Palmer; Relebohile Sekonyela; Clay C C Wang; Nancy P Keller
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-30       Impact factor: 11.205

7.  Genome of Diaporthe sp. provides insights into the potential inter-phylum transfer of a fungal sesquiterpenoid biosynthetic pathway.

Authors:  Jose Guedes de Sena Filho; Maureen B Quin; Daniel J Spakowicz; Jeffrey J Shaw; Kaury Kucera; Brian Dunican; Scott A Strobel; Claudia Schmidt-Dannert
Journal:  Fungal Biol       Date:  2016-04-12

8.  An Unconventional Melanin Biosynthesis Pathway in Ustilago maydis.

Authors:  Esmeralda Z Reyes-Fernández; Yi-Ming Shi; Peter Grün; Helge B Bode; Michael Bölker
Journal:  Appl Environ Microbiol       Date:  2021-01-15       Impact factor: 4.792

9.  A novel automethylation reaction in the Aspergillus nidulans LaeA protein generates S-methylmethionine.

Authors:  Alexander N Patananan; Jonathan M Palmer; Graeme S Garvey; Nancy P Keller; Steven G Clarke
Journal:  J Biol Chem       Date:  2013-03-26       Impact factor: 5.157

Review 10.  Translating biosynthetic gene clusters into fungal armor and weaponry.

Authors:  Nancy P Keller
Journal:  Nat Chem Biol       Date:  2015-09       Impact factor: 15.040

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