| Literature DB >> 35453937 |
Chia-Ying Lin1, Yi-Ting Yen2,3, Li-Ting Huang1, Tsai-Yun Chen4, Yi-Sheng Liu1, Shih-Yao Tang5, Wei-Li Huang2, Ying-Yuan Chen2, Chao-Han Lai6, Yu-Hua Dean Fang7, Chao-Chun Chang2, Yau-Lin Tseng2.
Abstract
This study aimed to build machine learning prediction models for predicting pathological subtypes of prevascular mediastinal tumors (PMTs). The candidate predictors were clinical variables and dynamic contrast-enhanced MRI (DCE-MRI)-derived perfusion parameters. The clinical data and preoperative DCE-MRI images of 62 PMT patients, including 17 patients with lymphoma, 31 with thymoma, and 14 with thymic carcinoma, were retrospectively analyzed. Six perfusion parameters were calculated as candidate predictors. Univariate receiver-operating-characteristic curve analysis was performed to evaluate the performance of the prediction models. A predictive model was built based on multi-class classification, which detected lymphoma, thymoma, and thymic carcinoma with sensitivity of 52.9%, 74.2%, and 92.8%, respectively. In addition, two predictive models were built based on binary classification for distinguishing Hodgkin from non-Hodgkin lymphoma and for distinguishing invasive from noninvasive thymoma, with sensitivity of 75% and 71.4%, respectively. In addition to two perfusion parameters (efflux rate constant from tissue extravascular extracellular space into the blood plasma, and extravascular extracellular space volume per unit volume of tissue), age and tumor volume were also essential parameters for predicting PMT subtypes. In conclusion, our machine learning-based predictive model, constructed with clinical data and perfusion parameters, may represent a useful tool for differential diagnosis of PMT subtypes.Entities:
Keywords: differential diagnosis; dynamic contrast-enhanced MRI; machine learning; perfusion parameters; prevascular mediastinal tumor
Year: 2022 PMID: 35453937 PMCID: PMC9026802 DOI: 10.3390/diagnostics12040889
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
Figure 1Flow diagram of patient selection and experimental procedure. Abbreviations: PMT = prevascular mediastinal tumor; TET = thymic epithelial tumor.
Demographic and clinical characteristics of 62 patients with PMTs.
| Variables | Number (%) |
|---|---|
| Sex | |
| Male | 28 (45) |
| Female | 34 (55) |
| Age (yr) | 52.3 ± 15.8 (22 to 82) |
| Treatment | |
| Surgery | 34 (54.8) |
| Chemotherapy | 28 (45.2) |
| PMT subtype | |
| Lymphoma | 17 (27.4) |
| TET | 45 (72.6) |
| Lymphoma subtype a | |
| Hodgkin | 6 (35.3) |
| Non-Hodgkin | 11 (64.7) |
| TET subtype b | |
| Thymoma | 31 (68.9) |
| Thymic carcinoma | 14 (31.1) |
| Invasiveness of thymoma c | |
| Noninvasive | 25 (80.6) |
| Invasive | 6 (19.4) |
Data are presented as mean ± standard deviations (range: min. to max.) for age, and n (%) for others. Abbreviations: PMT: prevascular mediastinal tumor; yr: year; TET: thymic epithelial tumor. a included 17 patients with lymphoma only. b included 45 patients with TET only. c included 31 patients with thymoma only.
Comparisons of age, MR-derived perfusion parameters, and tumor size data between patients with lymphoma and TET and between thymoma and thymic carcinoma.
| Variable | Lymphoma | TET ( | Thymoma ( | Thymic Carcinoma | ||
|---|---|---|---|---|---|---|
| Age (yr) | 30 (26, 48) | 59 (52, 65) | <0.001 *† | 56 (49, 65) | 62 (55, 69) | 0.169 |
| Ktrans (10−3 min−1) | 0.34 (0.11, 1.13) | 0.46 (0.22, 0.62) | 0.664 | 0.36 (0.17, 0.58) | 0.51 (0.45, 1.50) | 0.042 * |
| Kep (10−3 min−1) | 0.86 (0.67, 1.73) | 1.70 (0.90, 2.96) | 0.073 | 2.72 (1.14, 4.71) | 0.93 (0.72, 1.38) | 0.005 *† |
| Vp (10−3) | 0.01 (0.01, 0.03) | 0.02 (0.01, 0.05) | 0.444 | 0.02 (0.01, 0.05) | 0.03 (0.02, 0.07) | 0.086 |
| Ve (10−3) | 0.39 (0.13, 1.01) | 0.20 (0.08, 0.54) | 0.253 | 0.13 (0.06, 0.31) | 0.52 (0.20, 2.36) | 0.001 *† |
| TTP (× 102 s) | 1.29 (1.05, 1.96) | 1.09 (0.76, 1.75) | 0.087 | 0.89 (0.66, 1.29) | 1.72 (1.01, 1.96) | 0.003 *† |
| Max. conc. (10−3 mM) | 32 (18, 47) | 21 (11, 38) | 0.246 | 17 (9, 33) | 31 (16, 70) | 0.062 |
| Tumor volume (× 104 mm3) | 4.50 (2.06, 6.37) | 1.21 (0.57, 4.52) | 0.028 * | 1.10 (0.49, 4.40) | 1.60 (0.67, 5.06) | 0.624 |
| Surface area (× 104 mm2) | 2.49 (1.55, 3.84) | 0.80 (0.44, 2.78) | 0.027 * | 0.72 (0.42, 2.86) | 1.14 (0.55, 2.80) | 0.573 |
| Max. diameter (× 102 mm) | 0.76 (0.65, 1.02) | 0.45 (0.35, 0.71) | 0.001 *† | 0.43 (0.35, 0.72) | 0.51 (0.41, 0.72) | 0.315 |
Data are presented as median (inter-quartiles) and compared between two groups using the Mann–Whitney U test. Key: Kep = efflux rate constant from tissue EES into the blood plasma; Ktrans = efflux rate constant from blood plasma into the tissue EES; Vp = blood plasma volume per unit volume of tissue; Ve = EEs volume per unit volume of tissue; TTP = time to the peak of the concentration curve; TET = thymic epithelial tumor. * p < 0.05. † indicated significant difference after controlling the false discovery rate.
Figure 2Performance of predictive parameters using variable importance analysis. (A) Parameters for predicting PMT subtypes. (B) Parameters for predicting Hodgkin lymphoma. (C) Parameters for predicting invasive thymoma. Abbreviations: EES = extravascular extracellular space; Ktrans = efflux rate constant from blood plasma into the tissue EES; Kep = the efflux rate constant from tissue EES into the blood plasma; Ve= EES volume per unit of tissue; Vp = blood plasma volume per unit volume of tissue; TTP = time to peak of the concentration curve.
Figure 3The predictive model for differentiating three PMT subtypes (lymphoma, thymoma, and thymic carcinoma) based on 62 PMT patients. The total predictive accuracy was 72.58%. Abbreviation: TET = thymic epithelial tumor.
Figure 4Decision tree models. (A) The model for differentiating Hodgkin from non-Hodgkin lymphoma with a total prediction accuracy of 88.24%. (B) The model for differentiating invasive from noninvasive thymoma with a total prediction accuracy of 90.32%. Abbreviation: Kep = efflux rate constant from tissue EES into the blood plasma.