| Literature DB >> 35291295 |
Brian J Schimmoller1,2,3, Nídia S Trovão2,4, Molly Isbell1, Chirag Goel2,5, Benjamin F Heck6, Tenley C Archer2,7, Klint D Cardinal8, Neil B Naik8, Som Dutta2,9, Ahleah Rohr Daniel10, Afshin Beheshti2,11,12,3.
Abstract
The COVID-19 Exposure Assessment Tool (CEAT) allows users to compare respiratory relative risk to SARS-CoV-2 for various scenarios, providing understanding of how combinations of protective measures affect exposure, dose, and risk. CEAT incorporates mechanistic, stochastic and epidemiological factors including the: 1) emission rate of virus, 2) viral aerosol degradation and removal, 3) duration of activity/exposure, 4) inhalation rates, 5) ventilation rates (indoors/outdoors), 6) volume of indoor space, 7) filtration, 8) mask use and effectiveness, 9) distance between people, 10) group size, 11) current infection rates by variant, 12) prevalence of infection and immunity in the community, 13) vaccination rates of the community, and 14) implementation of COVID-19 testing procedures. Demonstration of CEAT, from published studies of COVID-19 transmission events, shows the model accurately predicts transmission. We also show how health and safety professionals at NASA Ames Research Center used CEAT to manage potential risks posed by SARS-CoV-2 exposures. Given its accuracy and flexibility, the wide use of CEAT will have a long lasting beneficial impact in managing both the current COVID-19 pandemic as well as a variety of other scenarios.Entities:
Year: 2022 PMID: 35291295 PMCID: PMC8923112 DOI: 10.1101/2022.03.02.22271806
Source DB: PubMed Journal: medRxiv
Figure 1.COVID-19 Exposure Assessment Tool Interface (CEAT) and background on the model utilized.
A) User interface of the interactive PDF for CEAT. B) The equations that the CEAT model uses to calculate results.
Figure 2.Validation of the CEAT with Known COVID-19 Spreading Events.
A) and B) The adjusted and unadjusted scatter plot comparing the observed infection rates of known events (found in Table 2) to CEAT predicted infection rates. C) and D) The adjusted and unadjusted scatter plot comparing the observed infection rates of known events to Wells-Riley model predicted infection rates. For A) - D) linear fits were made to the data points and the residuals of these fits are plotted underneath each plot. The R2 values for the fits are shown in the plots. E) Correlation plot of the observed infection rate to both the CEAT and Wells-Riley adjusted predicted infection rates. Correlation with additional parameters from the event is shown. The size of the nodes reflects the degree of correlation (i.e., larger the size the higher the correlation). Positive correlation is related to the higher shades of red, while negative correlation is related to higher shades of blue. Statistically significant correlations are denoted by *** p-value < 0.001, ** p-value < 0.01, and * p-value < 0.05. F) Scatter plot of the exposure risk for all eleven events determined by CEAT.
Summary of Factors considered in CEAT.
Mechanistic, stochastic, epidemiological factors are accounted for the model exposure and inhalation dose
| Factors considered in Exposure Dose Calculation | Factor Type | CEAT Step # | Basis and/or Range of Values used in CEAT |
|---|---|---|---|
| Likelihood of Infectious persons present in the group | Stochastic | 1 | Ranges over 5 orders of magnitude from the lowest (0.0001%) assumed for people adhering strictly to public health guidance, to the highest (100%) for those known to be infected. |
| Number of people in the group | Mechanistic/Stochastic | 2 | Ranges from 2 to 250 people. |
| Distance between people | Mechanistic | 3 | Users are given discrete options: 4.5 m (~15 ft), 3 m (~10 ft), 2 m (~6ft), 1 m (~3 ft), and 0.5 m (~1.5 ft). |
| Mask effectiveness | Mechanistic | 4 | Range of mask effectiveness values based on published data for cloth, surgical, and N-95 masks. (CDC, 2020) (Mueller et al., 2020) |
| Mask compliance on the group | Stochastic | 4 | Ranges between 0 and 100 percent. |
| Emission rate of Infectious aerosols released through respiration | Mechanistic | 5 | Range of viral RNA emissions rates by activity in viral quanta per hour (Buonanno, et al., August 2020) (Buonanno et al., December 2020) |
| Inhalation rate | Mechanistic | 6 | Typical inhalation rates for adults at various activity intensities (US EPA, 2015) |
| Duration of exposure | Mechanistic | 7 | Varies between 5 minutes and 12 hours |
| Indoors or outdoors activity | Mechanistic | 8 | Indoor or Outdoor options affect the form of the concentration model used. |
| Ventilation rates (air changes per hour [ACH] or air exchange rate [AER]) | Mechanistic | 8 | (Values based on published sources (CDC, 2019) (ANSI/ASHRAE Standard 62.1–2019, 2020) (Howard-Reed et al., 2002) |
| Aerosol settling rate | Mechanistic | 8 | Removal by deposition on surfaces (CIRES, 2020) |
| Virus degradation rate | Mechanistic | 8 | An ACH contribution from viral aerosol degradation (CIRES, 2020) |
| Recirculating room filtration rate and removal efficiency | Mechanistic | 8 | Recirculation of filtered air assumed to occur at a rate of 5 [L/s]/m2 (1 cfm/ft2) (ANSI/ASHRAE Standard 62.1–2019, 2020) |
| Volume of room or activity space | Mechanistic | 9 | Varies based on user-specified dimensions, with constraints based on number of people and specified distancing. Ceiling height ranges between 2.15 meters (7 feet) and 20 meters (65 feet). Room side dimensions range between 2 meters (7 feet) and 200 meters (650 feet). |
| Prevalence of COVID-19 in the community | Epidemiological/Stochastic | 10 | Active cases per 100,000 is estimated by the published “Average Daily Cases per 100,000 in the Last Week” available from various sources and estimates of the “Average Days Infectious” and “Undiagnosed Factor.” (REF) |
| Difference in the variants transmission rates versus wild type virus | Epidemiological | 10 | Users can adjust the equivalent exposure dose upward by a factor proportional to the reported increased variant transmission. |
| Impact of community’s or group’s immunity from recovery and vaccination | Epidemiological | 1 and 10 | Immunities are addressed in two ways: 1) Reduced shedding (3x reduction is used) (Levine-Tiefenbrun, et al., 2021); 2) User can enter value vaccine efficacy (from Graniss, et al., 2021 and Scobie, et al., 2021) to function as “effective immunity barrier” at a level consistent with its |
| Impact of surveillance testing for the group | Epidemiological | 1 | Estimate (Need to come up with a reference for this) |
Reported COVID-19 transmission events.
| Case Number | Event Description | Volume of Room or Facility (m3) | People at Event | Total Cases Attributed to the event (Secondary Cases) | Total Infected Total Susceptible | Primary Reference |
|---|---|---|---|---|---|---|
| Case 1 | Bus, Zhejiang Province, China, 19 Jan 2020 | 80.0 | 68 | 23 | 34% |
|
| Case 2 | Restaurant, Guangzhou, China, 24 Jan 2020 | 480.4 | 89 | 9 | 10% | Li, et al., 2021 |
| Case 3 | Meeting, Munich, Germany, 21 February 2020 | 210.0 | 13 | 12 | 100% | Hijnen, et al., 2020 |
| Case 4 | Commercial Aircraft, Flight VN54 (London, UK - Hanoi, Vietnam), 1 March 2020 | 662.2 | 217 | 16 | 7% |
|
| Case 5 | Recreational Squash Game, Maribor, Slovenia, 4 March 2020 | 458.5 | 2 | 1 | 100% |
|
| Case 6 | Call Center, South Korea, 8 March 2020 | 3267.0 | 216 | 94 | 44% |
|
| Case 7 | Choir Rehearsal, Skagit Valley, WA, USA, 10 March 2020 | 808.0 | 61 | 32 | 53% |
|
| Case 8 | Recreational Hockey, Tampa Bay, Florida USA 16 June 2020 | 14452.7 | 24 | 15 | 65% |
|
| Case 9 | Restaurant, Jeonju, South Korea, 17 June 2020 | 184.8 | 13 | 3 | 25% |
|
| Case 10 | Court Room, Vaud, Switzerland, 30 Sep 2020 | 149.5 | 10 | 4 | 44% |
|
| Case 11 (Omicron) | Holiday Party, Oslo, Norway, 30 Nov 2021 | 1062.7 | 111 | 80 | 72% | Norwegian Institute of Public Health, 2021 |
Figure 3.COVID-19 Exposure Assessment for Gathering Lasting 5 Hours.
Data was analyzed on January 31st, 2022 for three US counties from the lowest (Montgomery County, MD) to highest (Knox County, TN) COVID-19 cases. The time was kept constant for all data points which assumes an average gathering of around 5 hours. The vaccination rates and population recovered rates are displayed on top of the plot for each county. Different scenarios were represented for location (outdoors = triangle, indoors = circle), distancing (increasing point size relates with increasing distance), and mask usage (no masks = red, average masks = blue, and N95/KN95 = yellow). The background shading of the plot indicates whether the data points are considered low risk (light blue), medium risk (yellow), or high risk (red) for COVID-19 exposure.
Figure 4.COVID-19 Exposure Assessment for Determining Lowest Exposure Risk for In-Person Work by NASA Ames Research Center.
Exposure risk ratios using CEAT were calculated for 73 different scenarios (i.e., various locations and operations) at NASA ARC. The variables used for all ten steps are depicted for each scenario highlighting how various inputs affect the exposure risk ratios. The data for this figure is available in Data S1.
Figure 5.NASA Ames Research Center (ARC) Accepted Exposure Risk in Relation to Community Case Rates.
Exposure risk ratios were calculated on a biweekly basis for 76 different scenarios (i.e., various locations and operations) at NASA ARC starting March 1, 2020 upon approval to RTOW through September 1, 2021. Biweekly reassessments included changes in community conditions such as case rate, variant prevalence, and vaccination rates in California. The median of all projected exposure risk ratios was calculated on a biweekly basis to establish a “NASA ARC Accepted Median Exposure Risk” (blue). These values were plotted along with the California state 7-day case rate per 100 thousand (orange). Notations were made designating major events and/or policy changes that may have influenced trends and deviations. The background shading of the plot indicates whether the data points are considered low risk (light blue) or medium risk (yellow) for COVID-19 exposure.