| Literature DB >> 35277536 |
Seyma Toy1, Yusuf Secgin2, Zulal Oner3, Muhammed Kamil Turan4, Serkan Oner5, Deniz Senol6.
Abstract
The aim of this study is to test whether sex prediction can be made by using machine learning algorithms (ML) with parameters taken from computerized tomography (CT) images of cranium and mandible skeleton which are known to be dimorphic. CT images of the cranium skeletons of 150 men and 150 women were included in the study. 25 parameters determined were tested with different ML algorithms. Accuracy (Acc), Specificity (Spe), Sensitivity (Sen), F1 score (F1), Matthews correlation coefficient (Mcc) values were included as performance criteria and Minitab 17 package program was used in descriptive statistical analyses. p ≤ 0.05 value was considered as statistically significant. In ML algorithms, the highest prediction was found with 0.90 Acc, 0.80 Mcc, 0.90 Spe, 0.90 Sen, 0.90 F1 values as a result of LR algorithms. As a result of confusion matrix, it was found that 27 of 30 males and 27 of 30 females were predicted correctly. Acc ratios of other MLs were found to be between 0.81 and 0.88. It has been concluded that the LR algorithm to be applied to the parameters obtained from CT images of the cranium skeleton will predict sex with high accuracy.Entities:
Mesh:
Year: 2022 PMID: 35277536 PMCID: PMC8917237 DOI: 10.1038/s41598-022-07415-w
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Comparison of parametric data of males and females.
| Parameters | Sex | Mean ± std (cm) | p value |
|---|---|---|---|
| NNL | Male | 2.46 ± 0.34 | |
| Female | 2.30 ± 0.31 | ||
| NNZA | Male | 120.68 ± 11.12 | 0.35 |
| Female | 119.55 ± 9.92 | ||
| HGGA | Male | 120.22 ± 6.90 | 0.92 |
| Female | 120.30 ± 6.78 | ||
| RML | Male | 5.29 ± 0.51 | |
| Female | 4.54 ± 0.41 | ||
| CML | Male | 7.34 ± 0.57 | |
| Female | 7.06 ± 0.49 | ||
| GHGA | Male | 37.05 ± 4.60 | |
| Female | 38.99 ± 4.87 | ||
| HML | Male | 8.24 ± 0.56 | |
| Female | 7.55 ± 0.58 | ||
| COLI | Male | 106.61 ± 6.98 | 0.06 |
| Female | 105.07 ± 7.23 | ||
| CMHA | Male | 110.68 ± 10.41 | |
| Female | 114.82 ± 10.04 | ||
| HGGC | Male | 12.56 ± 0.79 | |
| Female | 11.44 ± 0.69 | ||
| COIC | Male | 8.61 ± 0.73 | |
| Female | 7.93 ± 0.67 | ||
| HGGMA | Male | 31.15 ± 4.10 | |
| Female | 25.57 ± 3.73 |
NNL: Nasion–nasal end point length, NNZA: Nasal end point–nasion–zygomatic angle, HGGA: Head of mandible– gonion–gnathion angle, RML: Ramus of the mandible length, CML: Corpus of the mandible length, GHGA: Gnathion–head of mandible– gonion angle, HML: Head of mandible–mental foramen length, COLI: Coronoid process–obliqua line–infradental angle, CMHA: Coronoid process–mandibular notch–head of mandible angle, HGGC: Head of mandible–gonion–gnathion curvature length, COIC: Coronoid process–obliqua line–infradental curvature length, HGGMA: Head of mandible–gonion–gnathion–mandibular notch area.
Significant values are in bold.
Comparison of non-parametric data of males and females.
| Parameters | Sex | Median (min–max), (cm) | p value |
|---|---|---|---|
| NVIA | Male | 76.65 (69.54–86.03) | 0.89 |
| Female | 76.66 (43.77–86.43) | ||
| NVIC | Male | 32.41 (29.04–40.50) | |
| Female | 30.84 (27.59–33.60) | ||
| NSVC | Male | 14.49 (12.20–18.14) | |
| Female | 13.49 (11.43–38.97) | ||
| ZA | Male | 77.86 (62.76–95.62) | 0.21 |
| Female | 77.22 (43.65–92.02) | ||
| PC | Male | 4.67 (3.15–5.53) | |
| Female | 4.14 (3.06–5.53) | ||
| NIVA | Male | 43.99 (14.18–73.93) | |
| Female | 43.73 (37.23–51.16) | ||
| PNIC | Male | 39.47 (35.32–43.93) | |
| Female | 37.13 (29.01–41.44) | ||
| VIC | Male | 17.78 (14.02–22.53) | |
| Female | 17.28 (13.14–29.72) | ||
| NFIA | Male | 70.88 (45.18–81.06) | 0.78 |
| Female | 70.60 (60.79–80.64) | ||
| NIC | Male | 34.90 (31.12–38.12) | |
| Female | 32.59 (23.45–37.39) | ||
| GA | Male | 125.31 (18.59–143.71) | 0.18 |
| Female | 125.58 (111.16–148.95) | ||
| COL | Male | 3.11 (2.13–7.36) | |
| Female | 2.81 (1.94–3.85) | ||
| HGGMC | Male | 29.86 (17.62–33.83) | |
| Female | 27.37 (23.08–32.79) |
NVIA: Nasion–vertex–inion angle, NVIC: Nasion–vertex–inion curvature length, NSVC: Nasion–superciliary arch–vertex curvature length, ZA: Zygomatic angle, PC: Piriform aperture curvature length, NIVA: Nasion–inion–vertex angle, PNIC: Piriform aperture–Nasal end point–inion curvature length, VIC: Vertex–inion curvature length, NFIA: Nasion–frontal tuber–inion angle, NIC: Nasal end point–inion curvature length, GA: Gonial angle, COL: Coronoid process–obliqua line length, HGGMC: Head of mandible–gonion–gnathion–mandibular notch curvature length.
Significant values are in bold.
Figure 1ROC curve.
ROC result table.
| Parameters | AUC (%95 CI) | Cutt-off | p | Sen | Spe |
|---|---|---|---|---|---|
| Age | 0.451 (0.385–0.516) | 59.5 | 0.141 | 0.467 | 0.54 |
| NVIA | 0.504 (0.439–0.570) | 76.7 | 0.896 | 0.5 | 0.5 |
| NVIC | 0.791 (0.741–0.841) | 31.56 | 0.000 | 0.72 | 0.28 |
| NSVC | 0.794 (0.744–0.845) | 13.99 | 0.000 | 0.713 | 0.287 |
| ZA | 0.541 (0.476–606) | 77.55 | 0.219 | 0.533 | 0.467 |
| NNL | 0.632 (0.570–0.695) | 2.38 | 0.000 | 0.587 | 0.413 |
| PC | 0.823 (0.775–0.871) | 4.36 | 0.000 | 0.753 | 0.247 |
| NIVA | 0.569 (0.504–0.634) | 43.79 | 0.038 | 0.513 | 0.487 |
| NNZA | 0.536 (0.470–0.601) | 120.77 | 0.286 | 0.527 | 0.473 |
| PNIC | 0.854 (0.810–0.897) | 38.35 | 0.000 | 0.78 | 0.22 |
| VIC | 0.639 (0.576–0.701) | 17.55 | 0.000 | 0.613 | 0.387 |
| NFIA | 0.509 (0.443–0.575) | 70.71 | 0.784 | 0.513 | 0.487 |
| BIC | 0.812 (0.763–0.860) | 33.59 | 0.000 | 0.753 | 0.247 |
| HGGA | 0.501 (0.435–0.566) | 120.07 | 0.987 | 0.48 | 0.52 |
| CGBA | 0.456 (0.391–0.521) | 125.55 | 0.189 | 0.493 | 0.507 |
| CGL | 0.877 (0.838–0.915) | 4.86 | 0.000 | 0.8 | 0.2 |
| GGL | 0.642 (0.580–0.704) | 7.18 | 0.000 | 0.587 | 0.413 |
| GHGA | 0.378 (0.315–0.442) | 38.34 | 0.000 | 0.427 | 0.573 |
| HML | 0.815 (0.767–0.864) | 7.91 | 0.000 | 0.767 | 0.233 |
| COL | 0.706 (0.648–0.764) | 2.95 | 0.000 | 0.648 | 0.764 |
| COLI | 0.557 (0.492–0.622) | 105.97 | 0.089 | 0.533 | 0.467 |
| CMHA | 0.383 (0.370–0.447) | 112.88 | 0.000 | 0.42 | 0.58 |
| HGGC | 0.863 (0.822–0.904) | 12.03 | 0.000 | 0.787 | 0.22 |
| COIC | 0.754 (0.700–0.808) | 8.25 | 0.000 | 0.667 | 0.333 |
| HGGMC | 0.869 (0.827–0.910) | 28.60 | 0.000 | 0.787 | 0.213 |
| HGGMA | 0.841 (0.797–0.884) | 28.28 | 0.000 | 0.767 | 0.233 |
Figure 2ML ROC curve.
Figure 3LR confusion matrix.
Tenfold cross validation results (%Acc).
| Testing set | LR | LDA | QDA | RF | ETC | DT |
|---|---|---|---|---|---|---|
| 1 | 87 | 87.33 | 85.33 | 85.33 | 75.33 | 78.67 |
| 2 | 86.33 | 87.67 | 86.67 | 85 | 75.67 | 81 |
| 3 | 86 | 87 | 86.33 | 86.67 | 74 | 83.67 |
| 4 | 87.67 | 88.33 | 87.33 | 85.33 | 78 | 80.67 |
| 5 | 86.33 | 87.67 | 86.67 | 87.67 | 80.33 | 80.33 |
| 6 | 85.33 | 88 | 86 | 84.33 | 78 | 79.33 |
| 7 | 87.67 | 88 | 86.67 | 85.33 | 77.33 | 80 |
| 8 | 86.33 | 87.33 | 87.33 | 87 | 78.67 | 80.33 |
| 9 | 87.67 | 88 | 86.67 | 86 | 75.67 | 79.33 |
| 10 | 87.33 | 88 | 86.33 | 85 | 79 | 79.33 |
| Mean | 87.766 | 87.733 | 86.533 | 85.766 | 77.200 | 80.266 |
| Std | 0.819 | 0.410 | 0.592 | 1.045 | 1.970 | 1.396 |
Figure 4RF algorithm SHAP explanatory image.
Figure 5(A) Sagittal, transversal and coronal images brought to orthogonal plane, (B) Overlapped image.
Length parameters and abbreviations.
| Parameters | Abbreviations |
|---|---|
| Ramus of the mandible length | RML |
| Corpus of the mandible length | CML |
| Head of mandible–mental foramen length | HML |
| Coronoid process–obliqua line length | COL |
| Nasion–nasal end point length | NNL |
Angle parameters and abbreviations.
| Parameters | Abbreviations |
|---|---|
| Head of mandible–gonion–gnathion angle | HGGA |
| Gonial angle | GA |
| Gnathion–head of mandible–gonion angle | GHGA |
| Coronoid process–obliqua line–infradental angle | COLI |
| Coronoid process–mandibular notch | CMHA |
| Nasion–vertex–inion angle | NVIA |
| Zygomatic angle | ZA |
| Nasion–inion–vertex angle | NIVA |
| Nasal end point–nasion–zygomatic angle | NNZA |
| Nasion–frontal tuber–inion angle | NFIA |
Curve lenght-area parameters and abbreviations.
| Parameters | Abbreviations |
|---|---|
| Head of mandible–gonion–gnathion curvature length | HGGC |
| Coronoid process–obliqua line–infradental curvature length | COIC |
| Head of mandible–gonion–gnathion–mandibular notch curvature length | HGGMC |
| Nasion–vertex–inion curvature length | NVIC |
| Nasion–superciliary arch–vertex curvature length | NSVC |
| Piriform aperture curvature length | PC |
| Piriform aperture–nasal end point–inion curvature length | PNIC |
| Vertex–inion curvature length | VIC |
| Nasal end point–inion curvature length | BIC |
| Head of mandible–gonion–gnathion–mandibular notch area | HGGMA |
Figure 6Demonstration of parameters (1: NVIA, 2: ZA, 3: COIC, 4: HGGA, 5: VIC, 6: NNZA, 7: COLI, 8: CML, 9: NIC, 10: NIVA, 11: CMHA, 12: RML, 13: NNL, 14: COL, 15: GA, 16: NFIA, 17: HML, 18: HGGC, 19: NVIC, 20: PC, 21: GCGA, 22: PNIC, 23: HGGMA, 24: NSVC, 25: HGGMC).