Literature DB >> 26572668

Machine Learning in Medicine.

Rahul C Deo1.   

Abstract

Spurred by advances in processing power, memory, storage, and an unprecedented wealth of data, computers are being asked to tackle increasingly complex learning tasks, often with astonishing success. Computers have now mastered a popular variant of poker, learned the laws of physics from experimental data, and become experts in video games - tasks that would have been deemed impossible not too long ago. In parallel, the number of companies centered on applying complex data analysis to varying industries has exploded, and it is thus unsurprising that some analytic companies are turning attention to problems in health care. The purpose of this review is to explore what problems in medicine might benefit from such learning approaches and use examples from the literature to introduce basic concepts in machine learning. It is important to note that seemingly large enough medical data sets and adequate learning algorithms have been available for many decades, and yet, although there are thousands of papers applying machine learning algorithms to medical data, very few have contributed meaningfully to clinical care. This lack of impact stands in stark contrast to the enormous relevance of machine learning to many other industries. Thus, part of my effort will be to identify what obstacles there may be to changing the practice of medicine through statistical learning approaches, and discuss how these might be overcome.
© 2015 American Heart Association, Inc.

Entities:  

Keywords:  artificial intelligence; computers; prognosis; risk factors; statistics

Mesh:

Year:  2015        PMID: 26572668      PMCID: PMC5831252          DOI: 10.1161/CIRCULATIONAHA.115.001593

Source DB:  PubMed          Journal:  Circulation        ISSN: 0009-7322            Impact factor:   29.690


  22 in total

1.  Learning the parts of objects by non-negative matrix factorization.

Authors:  D D Lee; H S Seung
Journal:  Nature       Date:  1999-10-21       Impact factor: 49.962

2.  Systematic analysis of breast cancer morphology uncovers stromal features associated with survival.

Authors:  Andrew H Beck; Ankur R Sangoi; Samuel Leung; Robert J Marinelli; Torsten O Nielsen; Marc J van de Vijver; Robert B West; Matt van de Rijn; Daphne Koller
Journal:  Sci Transl Med       Date:  2011-11-09       Impact factor: 17.956

3.  Validation of the Framingham coronary heart disease prediction scores: results of a multiple ethnic groups investigation.

Authors:  R B D'Agostino; S Grundy; L M Sullivan; P Wilson
Journal:  JAMA       Date:  2001-07-11       Impact factor: 56.272

4.  T-helper type 2-driven inflammation defines major subphenotypes of asthma.

Authors:  Prescott G Woodruff; Barmak Modrek; David F Choy; Guiquan Jia; Alexander R Abbas; Almut Ellwanger; Laura L Koth; Joseph R Arron; John V Fahy
Journal:  Am J Respir Crit Care Med       Date:  2009-05-29       Impact factor: 21.405

5.  Lebrikizumab treatment in adults with asthma.

Authors:  Jonathan Corren; Robert F Lemanske; Nicola A Hanania; Phillip E Korenblat; Merdad V Parsey; Joseph R Arron; Jeffrey M Harris; Heleen Scheerens; Lawren C Wu; Zheng Su; Sofia Mosesova; Mark D Eisner; Sean P Bohen; John G Matthews
Journal:  N Engl J Med       Date:  2011-08-03       Impact factor: 91.245

6.  A novel clinical risk prediction model for sudden cardiac death in hypertrophic cardiomyopathy (HCM risk-SCD).

Authors:  Constantinos O'Mahony; Fatima Jichi; Menelaos Pavlou; Lorenzo Monserrat; Aristides Anastasakis; Claudio Rapezzi; Elena Biagini; Juan Ramon Gimeno; Giuseppe Limongelli; William J McKenna; Rumana Z Omar; Perry M Elliott
Journal:  Eur Heart J       Date:  2013-10-14       Impact factor: 29.983

7.  Development of a prognostic model for breast cancer survival in an open challenge environment.

Authors:  Wei-Yi Cheng; Tai-Hsien Ou Yang; Dimitris Anastassiou
Journal:  Sci Transl Med       Date:  2013-04-17       Impact factor: 17.956

8.  Systematic analysis of challenge-driven improvements in molecular prognostic models for breast cancer.

Authors:  Adam A Margolin; Erhan Bilal; Erich Huang; Thea C Norman; Lars Ottestad; Brigham H Mecham; Ben Sauerwine; Michael R Kellen; Lara M Mangravite; Matthew D Furia; Hans Kristian Moen Vollan; Oscar M Rueda; Justin Guinney; Nicole A Deflaux; Bruce Hoff; Xavier Schildwachter; Hege G Russnes; Daehoon Park; Veronica O Vang; Tyler Pirtle; Lamia Youseff; Craig Citro; Christina Curtis; Vessela N Kristensen; Joseph Hellerstein; Stephen H Friend; Gustavo Stolovitzky; Samuel Aparicio; Carlos Caldas; Anne-Lise Børresen-Dale
Journal:  Sci Transl Med       Date:  2013-04-17       Impact factor: 17.956

9.  Prioritizing causal disease genes using unbiased genomic features.

Authors:  Rahul C Deo; Gabriel Musso; Murat Tasan; Paul Tang; Annie Poon; Christiana Yuan; Janine F Felix; Ramachandran S Vasan; Rameen Beroukhim; Teresa De Marco; Pui-Yan Kwok; Calum A MacRae; Frederick P Roth
Journal:  Genome Biol       Date:  2014-12-03       Impact factor: 13.583

10.  A critical assessment of Mus musculus gene function prediction using integrated genomic evidence.

Authors:  Lourdes Peña-Castillo; Murat Tasan; Chad L Myers; Hyunju Lee; Trupti Joshi; Chao Zhang; Yuanfang Guan; Michele Leone; Andrea Pagnani; Wan Kyu Kim; Chase Krumpelman; Weidong Tian; Guillaume Obozinski; Yanjun Qi; Sara Mostafavi; Guan Ning Lin; Gabriel F Berriz; Francis D Gibbons; Gert Lanckriet; Jian Qiu; Charles Grant; Zafer Barutcuoglu; David P Hill; David Warde-Farley; Chris Grouios; Debajyoti Ray; Judith A Blake; Minghua Deng; Michael I Jordan; William S Noble; Quaid Morris; Judith Klein-Seetharaman; Ziv Bar-Joseph; Ting Chen; Fengzhu Sun; Olga G Troyanskaya; Edward M Marcotte; Dong Xu; Timothy R Hughes; Frederick P Roth
Journal:  Genome Biol       Date:  2008-06-27       Impact factor: 13.583

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  512 in total

1.  Comparing Artificial Intelligence Platforms for Histopathologic Cancer Diagnosis.

Authors:  Andrew A Borkowski; Catherine P Wilson; Steven A Borkowski; L Brannon Thomas; Lauren A Deland; Stefanie J Grewe; Stephen M Mastorides
Journal:  Fed Pract       Date:  2019-10

Review 2.  Role of deep learning in infant brain MRI analysis.

Authors:  Mahmoud Mostapha; Martin Styner
Journal:  Magn Reson Imaging       Date:  2019-06-20       Impact factor: 2.546

3.  Applying machine learning to predict real-world individual treatment effects: insights from a virtual patient cohort.

Authors:  Gang Fang; Izabela E Annis; Jennifer Elston-Lafata; Samuel Cykert
Journal:  J Am Med Inform Assoc       Date:  2019-10-01       Impact factor: 4.497

4.  Learning About Machine Learning: The Promise and Pitfalls of Big Data and the Electronic Health Record.

Authors:  Rahul C Deo; Brahmajee K Nallamothu
Journal:  Circ Cardiovasc Qual Outcomes       Date:  2016-11-08

Review 5.  Biomarkers for Musculoskeletal Pain Conditions: Use of Brain Imaging and Machine Learning.

Authors:  Jeff Boissoneault; Landrew Sevel; Janelle Letzen; Michael Robinson; Roland Staud
Journal:  Curr Rheumatol Rep       Date:  2017-01       Impact factor: 4.592

Review 6.  Phenotype-Specific Treatment of Heart Failure With Preserved Ejection Fraction: A Multiorgan Roadmap.

Authors:  Sanjiv J Shah; Dalane W Kitzman; Barry A Borlaug; Loek van Heerebeek; Michael R Zile; David A Kass; Walter J Paulus
Journal:  Circulation       Date:  2016-07-05       Impact factor: 29.690

Review 7.  Precision medicine in cardiology.

Authors:  Elliott M Antman; Joseph Loscalzo
Journal:  Nat Rev Cardiol       Date:  2016-06-30       Impact factor: 32.419

Review 8.  Towards Precision in HF Pharmacotherapy.

Authors:  Nicholas B Norgard; Carolyn Hempel
Journal:  Curr Heart Fail Rep       Date:  2017-02

9.  Machine learning in the integration of simple variables for identifying patients with myocardial ischemia.

Authors:  Luis Eduardo Juarez-Orozco; Remco J J Knol; Carlos A Sanchez-Catasus; Octavio Martinez-Manzanera; Friso M van der Zant; Juhani Knuuti
Journal:  J Nucl Cardiol       Date:  2018-05-22       Impact factor: 5.952

10.  Machine learning approaches to personalize early prediction of asthma exacerbations.

Authors:  Joseph Finkelstein; In Cheol Jeong
Journal:  Ann N Y Acad Sci       Date:  2016-09-14       Impact factor: 5.691

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