Literature DB >> 15563589

Printed covalent glycan array for ligand profiling of diverse glycan binding proteins.

Ola Blixt1, Steve Head, Tony Mondala, Christopher Scanlan, Margaret E Huflejt, Richard Alvarez, Marian C Bryan, Fabio Fazio, Daniel Calarese, James Stevens, Nahid Razi, David J Stevens, John J Skehel, Irma van Die, Dennis R Burton, Ian A Wilson, Richard Cummings, Nicolai Bovin, Chi-Huey Wong, James C Paulson.   

Abstract

Here we describe a glycan microarray constructed by using standard robotic microarray printing technology to couple amine functionalized glycans to an amino-reactive glass slide. The array comprises 200 synthetic and natural glycan sequences representing major glycan structures of glycoproteins and glycolipids. The array has remarkable utility for profiling the specificity of a diverse range of glycan binding proteins, including C-type lectins, siglecs, galectins, anticarbohydrate antibodies, lectins from plants and microbes, and intact viruses.

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Year:  2004        PMID: 15563589      PMCID: PMC534418          DOI: 10.1073/pnas.0407902101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

Review 1.  Carbohydrate arrays as tools for glycomics.

Authors:  Kerry R Love; Peter H Seeberger
Journal:  Angew Chem Int Ed Engl       Date:  2002-10-04       Impact factor: 15.336

2.  Fabrication of carbohydrate chips for studying protein-carbohydrate interactions.

Authors:  Sungjin Park; Injae Shin
Journal:  Angew Chem Int Ed Engl       Date:  2002-09-02       Impact factor: 15.336

Review 3.  A novel adhesion pathway that regulates dendritic cell trafficking and T cell interactions.

Authors:  Yvette van Kooyk; Teunis B H Geijtenbeek
Journal:  Immunol Rev       Date:  2002-08       Impact factor: 12.988

Review 4.  An early taste of functional glycomics.

Authors:  Milan Mrksich
Journal:  Chem Biol       Date:  2004-06

5.  Carbohydrate arrays for the evaluation of protein binding and enzymatic modification.

Authors:  Benjamin T Houseman; Milan Mrksich
Journal:  Chem Biol       Date:  2002-04

6.  The potent anti-HIV protein cyanovirin-N contains two novel carbohydrate binding sites that selectively bind to Man(8) D1D3 and Man(9) with nanomolar affinity: implications for binding to the HIV envelope protein gp120.

Authors:  C A Bewley; S Otero-Quintero
Journal:  J Am Chem Soc       Date:  2001-05-02       Impact factor: 15.419

Review 7.  Oligosaccharide specificity of galectins: a search by frontal affinity chromatography.

Authors:  Jun Hirabayashi; Tomomi Hashidate; Yoichiro Arata; Nozomu Nishi; Takanori Nakamura; Mitsuomi Hirashima; Tadasu Urashima; Toshihiko Oka; Masamitsu Futai; Werner E G Muller; Fumio Yagi; Ken-ichi Kasai
Journal:  Biochim Biophys Acta       Date:  2002-09-19

8.  The broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2G12 recognizes a cluster of alpha1-->2 mannose residues on the outer face of gp120.

Authors:  Christopher N Scanlan; Ralph Pantophlet; Mark R Wormald; Erica Ollmann Saphire; Robyn Stanfield; Ian A Wilson; Hermann Katinger; Raymond A Dwek; Pauline M Rudd; Dennis R Burton
Journal:  J Virol       Date:  2002-07       Impact factor: 5.103

9.  The mannose-dependent epitope for neutralizing antibody 2G12 on human immunodeficiency virus type 1 glycoprotein gp120.

Authors:  Rogier W Sanders; Miro Venturi; Linnea Schiffner; Roopa Kalyanaraman; Hermann Katinger; Kenneth O Lloyd; Peter D Kwong; John P Moore
Journal:  J Virol       Date:  2002-07       Impact factor: 5.103

10.  Oligosaccharide microarrays for high-throughput detection and specificity assignments of carbohydrate-protein interactions.

Authors:  Shigeyuki Fukui; Ten Feizi; Christine Galustian; Alexander M Lawson; Wengang Chai
Journal:  Nat Biotechnol       Date:  2002-09-03       Impact factor: 54.908

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  446 in total

1.  Bishydrazide glycoconjugates for lectin recognition and capture of bacterial pathogens.

Authors:  Avijit Kumar Adak; Alexei P Leonov; Ning Ding; Jyothi Thundimadathil; Sumith Kularatne; Philip S Low; Alexander Wei
Journal:  Bioconjug Chem       Date:  2010-10-06       Impact factor: 4.774

2.  Analysis of Tn antigenicity with a panel of new IgM and IgG1 monoclonal antibodies raised against leukemic cells.

Authors:  Ola Blixt; Olga I Lavrova; Dmitriy V Mazurov; Emiliano Cló; Stjepan K Kracun; Nicolai V Bovin; Alexander V Filatov
Journal:  Glycobiology       Date:  2011-12-05       Impact factor: 4.313

3.  Avian-type receptor-binding ability can increase influenza virus pathogenicity in macaques.

Authors:  Tokiko Watanabe; Kyoko Shinya; Shinji Watanabe; Masaki Imai; Masato Hatta; Chengjun Li; Ben F Wolter; Gabriele Neumann; Anthony Hanson; Makoto Ozawa; Shinya Yamada; Hirotaka Imai; Saori Sakabe; Ryo Takano; Kiyoko Iwatsuki-Horimoto; Maki Kiso; Mutsumi Ito; Satoshi Fukuyama; Eiryo Kawakami; Takeo Gorai; Heather A Simmons; Daniel Schenkman; Kevin Brunner; Saverio V Capuano; Jason T Weinfurter; Wataru Nishio; Yoshimasa Maniwa; Tatsuhiko Igarashi; Akiko Makino; Emily A Travanty; Jieru Wang; Anette Kilander; Susanne G Dudman; M Suresh; Robert J Mason; Olav Hungnes; Thomas C Friedrich; Yoshihiro Kawaoka
Journal:  J Virol       Date:  2011-09-21       Impact factor: 5.103

4.  Structural characterization of the hemagglutinin receptor specificity from the 2009 H1N1 influenza pandemic.

Authors:  Rui Xu; Ryan McBride; Corwin M Nycholat; James C Paulson; Ian A Wilson
Journal:  J Virol       Date:  2011-11-09       Impact factor: 5.103

5.  Sugar-binding proteins from fish: selection of high affinity "lambodies" that recognize biomedically relevant glycans.

Authors:  Xia Hong; Mark Z Ma; Jeffrey C Gildersleeve; Sudipa Chowdhury; Joseph J Barchi; Roy A Mariuzza; Michael B Murphy; Li Mao; Zeev Pancer
Journal:  ACS Chem Biol       Date:  2012-10-08       Impact factor: 5.100

6.  Quantifiable fluorescent glycan microarrays.

Authors:  Xuezheng Song; Baoyun Xia; Yi Lasanajak; David F Smith; Richard D Cummings
Journal:  Glycoconj J       Date:  2007-09-01       Impact factor: 2.916

7.  Novel fluorescent glycan microarray strategy reveals ligands for galectins.

Authors:  Xuezheng Song; Baoyun Xia; Sean R Stowell; Yi Lasanajak; David F Smith; Richard D Cummings
Journal:  Chem Biol       Date:  2009-01-30

Review 8.  Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.

Authors:  B S Bochner
Journal:  Clin Exp Allergy       Date:  2009-03       Impact factor: 5.018

9.  Multivalent interactions with gp120 are required for the anti-HIV activity of Cyanovirin.

Authors:  Yinan Liu; Jacob R Carroll; Lindsey A Holt; James McMahon; Barbara Giomarelli; Giovanna Ghirlanda
Journal:  Biopolymers       Date:  2009       Impact factor: 2.505

10.  A lectin from the mussel Mytilus galloprovincialis has a highly novel primary structure and induces glycan-mediated cytotoxicity of globotriaosylceramide-expressing lymphoma cells.

Authors:  Yuki Fujii; Naoshi Dohmae; Koji Takio; Sarkar M A Kawsar; Ryo Matsumoto; Imtiaj Hasan; Yasuhiro Koide; Robert A Kanaly; Hidetaro Yasumitsu; Yukiko Ogawa; Shigeki Sugawara; Masahiro Hosono; Kazuo Nitta; Jiharu Hamako; Taei Matsui; Yasuhiro Ozeki
Journal:  J Biol Chem       Date:  2012-10-23       Impact factor: 5.157

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