| Literature DB >> 34962769 |
Marina Toplak1, Robin Teufel1.
Abstract
The structural diversification of natural products is instrumental to their versatile bioactivities. In this context, redox tailoring enzymes are commonly involved in the modification and functionalization of advanced pathway intermediates en route to the mature natural products. In recent years, flavoprotein monooxygenases have been shown to mediate numerous redox tailoring reactions that include not only (aromatic) hydroxylation, Baeyer-Villiger oxidation, or epoxidation reactions but also oxygenations that are coupled to extensive remodeling of the carbon backbone, which are often central to the installment of the respective pharmacophores. In this Perspective, we will highlight recent developments and discoveries in the field of flavoenzyme catalysis in bacterial natural product biosynthesis and illustrate how the flavin cofactor can be fine-tuned to enable chemo-, regio-, and stereospecific oxygenations via distinct flavin-C4a-peroxide and flavin-N5-(per)oxide species. Open questions remain, e.g., regarding the breadth of chemical reactions enabled particularly by the newly discovered flavin-N5-oxygen adducts and the role of the protein environment in steering such cascade-like reactions. Outstanding cases involving different flavin oxygenating species will be exemplified by the tailoring of bacterial aromatic polyketides, including enterocin, rubromycins, rishirilides, mithramycin, anthracyclins, chartreusin, jadomycin, and xantholipin. In addition, the biosynthesis of tropone natural products, including tropolone and tropodithietic acid, will be presented, which features a recently described prototypical flavoprotein dioxygenase that may combine flavin-N5-peroxide and flavin-N5-oxide chemistry. Finally, structural and mechanistic features of selected enzymes will be discussed as well as hurdles for their application in the formation of natural product derivatives via bioengineering.Entities:
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Year: 2021 PMID: 34962769 PMCID: PMC8772269 DOI: 10.1021/acs.biochem.1c00763
Source DB: PubMed Journal: Biochemistry ISSN: 0006-2960 Impact factor: 3.162
Figure 1Simplified overview of the bacterial biosynthesis of rubromycin-type polyketides (panel a) as well as other examples of mature aromatic polyketides (panel b) produced by type II polyketide synthases (PKS). The biosynthesis of tropones is shown in panel c. Key tailoring reactions catalyzed by GrhO5/RubL and TdaE are highlighted with dashed boxes. See the text for details. O2-derived oxygen atoms incorporated by flavoprotein mono- and dioxygenases are colored red.
Figure 2Reaction mechanisms of selected flavoprotein oxygenases involved in natural product biosynthetic pathways. Dark blue box, FlC4aOOH-dependent aromatic hydroxylation of reduced collinone catalyzed by the group A FPMO GrhO5 (Uniprot entry Q8KSX7). Light blue box, FlC4aOO-dependent monooxygenation of premithramycin B to the corresponding lactone catalyzed by the BVMO MtmOIV (Uniprot entry Q194P4). Red and orange boxes, suggested flavoprotein dioxygenase functionality of TdaE (Uniprot entry I7DWF3) presumably involving the consecutive FlN5OO-dependent coenzyme A-ester oxygenolysis (red box) and FlN5O-dependent epoxidation of the tropone-2-carboxylate intermediate (orange box). Introduced oxygen atoms derived from O2 are colored red. All shown flavin-oxygen adducts are formed from the reaction of Flred with O2.
Figure 3Selected bacterial flavoenzyme-dependent aromatic polyketide tailoring reactions. Dark blue box, reactions catalyzed by the aromatic hydroxylases (class A FPMOs) GrhO5 (Uniprot entry Q8KSX7) and RdmE (Uniprot entry Q54530) involved in the biosynthesis of griseorhodin A (3) and daunorubicin (2), respectively. Light blue box, Baeyer-Villiger-type monooxygenations proposed for MtmOIV (Uniprot entry Q194P4), XanO4 (Uniprot entry I1SKW8), and ChaZ (Uniprot entry Q4R0K8), participating in biosynthesis of mithramycin B (7), xantholipin, and chartreusin (8), respectively. These enzymes are assumed to rely on classical C4a-oxygenated flavins for catalysis. Orange box, redox tailoring reactions catalyzed by EncM (Uniprot entry Q9KHK2) in the biosynthesis of enterocin (1) depending on a flavin-N5-oxide as the oxygenating species. Aside from EncM, TdaE involved in bacterial tropone biosyntheses likely also utilizes N5-oxygenated flavins as catalytically active species (see Figure ). Proposed products of the oxygenation reactions discussed in this article are highlighted with red boxes. Note that only selected steps are shown for each enzyme reaction.