Literature DB >> 34879231

A transcriptional rheostat couples past activity to future sensory responses.

Tatsuya Tsukahara1, David H Brann1, Stan L Pashkovski1, Grigori Guitchounts1, Thomas Bozza2, Sandeep Robert Datta3.   

Abstract

Animals traversing different environments encounter both stable background stimuli and novel cues, which are thought to be detected by primary sensory neurons and then distinguished by downstream brain circuits. Here, we show that each of the ∼1,000 olfactory sensory neuron (OSN) subtypes in the mouse harbors a distinct transcriptome whose content is precisely determined by interactions between its odorant receptor and the environment. This transcriptional variation is systematically organized to support sensory adaptation: expression levels of more than 70 genes relevant to transforming odors into spikes continuously vary across OSN subtypes, dynamically adjust to new environments over hours, and accurately predict acute OSN-specific odor responses. The sensory periphery therefore separates salient signals from predictable background via a transcriptional rheostat whose moment-to-moment state reflects the past and constrains the future; these findings suggest a general model in which structured transcriptional variation within a cell type reflects individual experience.
Copyright © 2021 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Act-seq; adaptation; functional imaging; gene expression programs; homeostasis; odor coding; odorant receptor; olfaction; sensory neurons; single-cell RNA sequencing; transcription

Mesh:

Substances:

Year:  2021        PMID: 34879231      PMCID: PMC8758202          DOI: 10.1016/j.cell.2021.11.022

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  116 in total

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Authors:  Ann Marie McNamara; Phillip D Magidson; Christiane Linster; Donald A Wilson; Thomas A Cleland
Journal:  Learn Mem       Date:  2008-02-22       Impact factor: 2.460

3.  Olfactory computation and object perception.

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Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-01       Impact factor: 11.205

4.  Cyclic Regulation of Sensory Perception by a Female Hormone Alters Behavior.

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Journal:  Cell       Date:  2015-06-04       Impact factor: 41.582

5.  Comparison of odor receptive field plasticity in the rat olfactory bulb and anterior piriform cortex.

Authors:  D A Wilson
Journal:  J Neurophysiol       Date:  2000-12       Impact factor: 2.714

Review 6.  The self-tuning neuron: synaptic scaling of excitatory synapses.

Authors:  Gina G Turrigiano
Journal:  Cell       Date:  2008-10-31       Impact factor: 41.582

7.  Agonist-independent GPCR activity regulates anterior-posterior targeting of olfactory sensory neurons.

Authors:  Ai Nakashima; Haruki Takeuchi; Takeshi Imai; Harumi Saito; Hiroshi Kiyonari; Takaya Abe; Min Chen; Lee S Weinstein; C Ron Yu; Daniel R Storm; Hirofumi Nishizumi; Hitoshi Sakano
Journal:  Cell       Date:  2013-09-12       Impact factor: 41.582

8.  Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis.

Authors:  Naresh K Hanchate; Kunio Kondoh; Zhonghua Lu; Donghui Kuang; Xiaolan Ye; Xiaojie Qiu; Lior Pachter; Cole Trapnell; Linda B Buck
Journal:  Science       Date:  2015-11-05       Impact factor: 47.728

9.  Activity-dependent genes in mouse olfactory sensory neurons.

Authors:  Adrian M Fischl; Paula M Heron; Arnold J Stromberg; Timothy S McClintock
Journal:  Chem Senses       Date:  2014-04-01       Impact factor: 3.160

10.  Identifying gene expression programs of cell-type identity and cellular activity with single-cell RNA-Seq.

Authors:  Dylan Kotliar; Adrian Veres; M Aurel Nagy; Shervin Tabrizi; Eran Hodis; Douglas A Melton; Pardis C Sabeti
Journal:  Elife       Date:  2019-07-08       Impact factor: 8.140

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  3 in total

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Authors:  Shawn D Burton; Audrey Brown; Thomas P Eiting; Isaac A Youngstrom; Thomas C Rust; Michael Schmuker; Matt Wachowiak
Journal:  Elife       Date:  2022-07-21       Impact factor: 8.713

3.  Transcriptional adaptation of olfactory sensory neurons to GPCR identity and activity.

Authors:  Luis Flores Horgue; Alexis Assens; Leon Fodoulian; Leonardo Marconi; Joël Tuberosa; Alexander Haider; Madlaina Boillat; Alan Carleton; Ivan Rodriguez
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  3 in total

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